Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01959 ATGTCAATGGCTTCGACTCTCACCATAGTAAGAAATCCCATTTTCCTCACTCACCATTACCAACTCAACAAGCACTTCACAACACCTTCTTCCTTACGCCTCCTCAGTTTCGCAAAGATGGAAGGAAGTGAGATCAGCGAGGAAGTGGTGGAGGATTCGAGAGCGAAGAGGAAAATTTTTGTTGCTGGAGCCACTGGTAGCACTGGGAAAAGAATCGTTGAGCAGTTATTGGCAAAGGGTTTTTCTGTTAAGGCTGGGGTTAGGGATTTGGACAAGGCCAAGTCCACCCTTTCCTCTGCCAACCCATCTCTTCAAATTGTAAAAGCTGATGTCACAGAGGGGTCTGATAAGCTAGCTGAAGCCATTGGTGATGATTCAGAAGCAGTGGTATGTGCCACAGGCTTTCGGCCAGGGTGGGATTTGCTTGCTCCATGGAAGGTTGACAATTTTGGTACTGTAAACCTTGTTGAAGCATGCAGGAAACGTAATGTGAACAGATTCATTCTTATCAGTTCCATTTTAGTTAATGGAGCATCTATGGGACAGCTACTCAATCCAGCTTACATATTTCTTAATGTTTTTGGACTCACCTTAGTAGCAAAACTACAGGCAGAGAATTATATAAGGAAATCTGGCATAAACTACACAATTATAAGACCGGGCGGGTTGAGAAATGATCCTCCAACTGGAAATGTTGTTATGGAGCCAGAGGACACCCTTTATGAAGGTTCCATATCCAGAGATCAAGTTGCGGAAGTAGCTGTGGAGGCATTGGCTTATCCTGAGGCATCTTTTAAAGTCGTGGAAATTGTGTCTCGCCCAGATGCTGCTAAGCGTTCATACCATGATCTTTTTGGTTCCATAAGGCAGCGATGA 876 0.4441 MSMASTLTIVRNPIFLTHHYQLNKHFTTPSSLRLLSFAKMEGSEISEEVVEDSRAKRKIFVAGATGSTGKRIVEQLLAKGFSVKAGVRDLDKAKSTLSSANPSLQIVKADVTEGSDKLAEAIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVNRFILISSILVNGASMGQLLNPAYIFLNVFGLTLVAKLQAENYIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVEALAYPEASFKVVEIVSRPDAAKRSYHDLFGSIRQR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01959 291 PANTHER FLAVIN REDUCTASE-RELATED 51 289 - -
Viun3g01959 291 CDD SDR_a5 58 273 - -
Viun3g01959 291 Gene3D - 42 281 - -
Viun3g01959 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 272 IPR036291 -
Viun3g01959 291 Pfam NAD(P)H-binding 63 260 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01959 Viun-Chr3 15255895 15258222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01959 56 188 Monolignol Biosynthesis Gene Families AT2G33590 33.803 6.70e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01959 - - gmx:100812074 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01959 3 15255895 15258222 Viun3g01959 3 15255895 15258222 ECH