Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01926 ATGTCTGTTGAACCTAAAGAACTTTACTACCAGGACCTTGTCCTAGACCACAACAATCACCACGGAACAGGAGGAGGAGGAGGAGGAGGAGGATCTGACATGTACCAAAAGCACTTTTCCACTTCCTTAATCCCTGCGGTTTCAACACCCTATGACTCACAACAACCCTTTGATCCCTCCTACATGACCTTCACCGAGTGTTTGCAAGGGGGCATGGACTACAATTCTCTTGCAACTTCCTTTGGCCTTTCTCCTTCTTCATCCGAGGTTTTCTCATCTGTTGAAGGGAACCACAAGCCTGCAGAAGGAGGAGATGGAGCTGCTGCCACTGCTGCCACCGAAACCCTTGCCACTCTTAACTCATCTATCTCTTCTTCATCTTCTGAAGCCGGGGCCGAAGAAGATTCGGGGAAGAGCAAAAAGGATAGGCAGGTGAAAACAGAAGAAGGAGGAGAAAACTCTAAGAAAGGGAACAAGGATAAGAAGAAAGGAGAGAAGAAGCAGAAGGAGCCGAGGTTTGCCTTCATGACCAAGAGTGAGGTTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCTTACCCAAGGAGCTACTACAGGTGCACTACGCAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAGGACCCAACCACTGTGATAACAACGTATGAAGGTCAGCACAACCATCCGGTCCCCACATCGCTGAGAGGGAATGCGGCCGCAGGAATGTTCACACCTTCTTTGCTCGCCACACCAACTCCACTTGCAGCCGGGTCAAACTTCCCTCAAGATCTCTTCCTTCACATGCATCATCAGCATCACCACCACCACCACCACCCTCACCATCACTTTCACAACACCCTCTTCTCCACCCAATCAACAAACGCCGTTACCACCACCACCACCGCCGTTACCACCGCCGCCACTCCCCCCTCCATTTACTCTTCCTACAACATTAACAACTCTCTTCTTCACAACCAGTATCTTCCTTCTGAATATGGCCTCCTTCAAGACATAGTCCCTTCCATCTTCCACAACAAGACACACCACCAGAATTAA 1095 0.4932 MSVEPKELYYQDLVLDHNNHHGTGGGGGGGGSDMYQKHFSTSLIPAVSTPYDSQQPFDPSYMTFTECLQGGMDYNSLATSFGLSPSSSEVFSSVEGNHKPAEGGDGAAATAATETLATLNSSISSSSSEAGAEEDSGKSKKDRQVKTEEGGENSKKGNKDKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAGMFTPSLLATPTPLAAGSNFPQDLFLHMHHQHHHHHHHPHHHFHNTLFSTQSTNAVTTTTTAVTTAATPPSIYSSYNINNSLLHNQYLPSEYGLLQDIVPSIFHNKTHHQN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01926 364 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 105 290 IPR044810 GO:0003700
Viun3g01926 364 FunFam WRKY transcription factor 57 170 244 - -
Viun3g01926 364 SUPERFAMILY WRKY DNA-binding domain 176 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g01926 364 ProSiteProfiles WRKY domain profile. 179 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g01926 364 MobiDBLite consensus disorder prediction 85 174 - -
Viun3g01926 364 MobiDBLite consensus disorder prediction 113 132 - -
Viun3g01926 364 MobiDBLite consensus disorder prediction 133 174 - -
Viun3g01926 364 SMART WRKY_cls 184 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g01926 364 Gene3D WRKY domain 168 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g01926 364 Pfam WRKY DNA -binding domain 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01926 Viun-Chr3 14747770 14750084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01926 53 356 WRKY Transcription Factor Family AT4G18170 49.191 8.17e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun3g01926 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01926 - - gmx:100787050 466.077