Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01925 ATGGAAAAGGAACCTCTACTCCCATATTTCAGCCCCAGAAAGAAGCCCCTGGCATTGTCACCACTACGTCCCTTGCCAGAGCACGAAGACATGGTTCATCCAATGACCCCCATGGAATTCAAGGACCGTCTCATCTTTGGACCTGTTTGTGCTACCCCAAGGGACCCTACACCTTTGGCTGATGCCTTAACACTCCCCCACAATTCCCCAAAATGTTCCTCTTCTACCTCGCAGGACTGTGCATCGCCTTCACGGTTTGATTCTCAGTCGCAACAACCATCCTCTTGGCTCCTTGACCCCAATTACTCCTGCCGGAAAACAAACCTTCACCGCTCCAAAACCGCGCCGGCCATGGCGGTGATCAGCGATTTCAACCCCCAATCCTCTGTGCCAAGGCCGCAATTTGGCAGCCAGAGTGTTGTGCGCCAGGGTGTGATTCTTCTTGCTCTTTATTTGGCATTAGGGGTTGTCATTTATTGGTTCAATCGTAATAATTTCTCAGCTTCCGAGACTCATCCTGTAGTTGATGCATTGTATTTTTGTATAGTCACAATGTGCACAATAGGATATGGTGACATCACTCCGAATAGCACAGCCACTAAACTTTTCTCTATATTGTTTGTATTGGTGGGGTTTGGATTTATAGACATATTGCTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAGTCATATGTTGACAGCAGTGAAGGGGAGGAGGGGTGAGAAGGATGGAAAGTCTTATATAATTGATGTGAAGAAAGGGAGGATGAGGATCCGTTTGAAGGTAGCGTTGGCGTTGGGAGTTGTGGTGATTTGTATTGGGGTAGGTGTGGGGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGACTCTTTTTATCTTTCAGTTATGTCGGTTACTACGGTCGGGTATGGAGACCATGCTTTCAAGACCATGCATGGCCGGATCTTTGCTGCAATTTGGTTGCTCGTGTCAACTCTTGCCGTGGCTCGAGCGTTCCTCTATTTGGCTGAGGCAAGAGTGGATAAGCGGCACAGGATGATGGCGAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCAGACATAGACAACAATGGCTTTGTGAGTAAATCAGAATATGTCATATACAAGCTCAAGGAGATGGGAAAAGTATCTGAGAAGGACGTCATGCAGGTTAGTGAGAAGTTTGATAGACTAGATGCTGGCAACTGCGGAAAAATAACCCTTGCTGATCTTATGGAGCCTCATAGTTGA 1278 0.4695 MEKEPLLPYFSPRKKPLALSPLRPLPEHEDMVHPMTPMEFKDRLIFGPVCATPRDPTPLADALTLPHNSPKCSSSTSQDCASPSRFDSQSQQPSSWLLDPNYSCRKTNLHRSKTAPAMAVISDFNPQSSVPRPQFGSQSVVRQGVILLALYLALGVVIYWFNRNNFSASETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQESHMLTAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICIGVGVGVMHFVEKLGWLDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDVMQVSEKFDRLDAGNCGKITLADLMEPHS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01925 425 MobiDBLite consensus disorder prediction 67 99 - -
Viun3g01925 425 SUPERFAMILY Voltage-gated potassium channels 140 226 - -
Viun3g01925 425 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Viun3g01925 425 Gene3D - 334 424 - -
Viun3g01925 425 SUPERFAMILY Voltage-gated potassium channels 255 361 - -
Viun3g01925 425 Gene3D - 269 333 - -
Viun3g01925 425 Pfam Ion channel 147 226 IPR013099 -
Viun3g01925 425 Pfam Ion channel 271 340 IPR013099 -
Viun3g01925 425 PRINTS Two pore domain K+ channel signature 303 312 IPR003280 GO:0005267|GO:0016020|GO:0071805
Viun3g01925 425 PRINTS Two pore domain K+ channel signature 183 211 IPR003280 GO:0005267|GO:0016020|GO:0071805
Viun3g01925 425 FunFam Two-pore potassium channel 3 248 362 - -
Viun3g01925 425 SUPERFAMILY EF-hand 362 421 IPR011992 -
Viun3g01925 425 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 147 399 IPR003280 GO:0005267|GO:0016020|GO:0071805
Viun3g01925 425 FunFam Two-pore potassium channel 5 129 239 - -
Viun3g01925 425 MobiDBLite consensus disorder prediction 65 99 - -
Viun3g01925 425 Gene3D - 139 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01925 Viun-Chr3 14696971 14710395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01925 4 422 Ion Channels AT4G18160 62.844 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01925 K05389 - gmx:100804249 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01925 3 14696971 14710395 Viun3g01925 3 14696971 14710395 ECH