Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01909 ATGGAGCAACCTCACAAGGGTATGGTCACAAGATACTCGGATGAAAAAAATAACCCTTCAACTCGACATTTCATCCATGGATATCACTTAATACAAGGACAGATGAACCATGGTATGGAAGACTATATTTTCGCTCAACATAGGAATCTCGATGGTTATGACTTAGGATTGTATGCAATATTTGATGGTCACTCCGGTCATGAAGTTGCAAAATACTTGCGAAACCATCTATTCGAAAATATACTGAGTGAGCCTGGTTTCTGGGAAAATCCAGTGCAAGCTATTAAGAAAGCATGCAAAGCAACGGATGATGAGGTTTTAGAAAACGTAGCTGATTCACGTGGAGGATCAACAGCAGTTGCAGCAATATTAGTCAATGGAGTAAAGCTACTGGTAGCCAATGTTGGTGATTCTAGAGCAATATCATGCAAAAATGGTCGAGCAAACCCACTTACTGTGGACCATGATCCAGAGAAGGAAAAAGCTCTTGTTGAGAGCAGAGGAGGTTTTGTGTCCAAGAGACCTGGGAATGTTCCAAGAGTGGATGGACAATTAGCAATGACAAGGGCATTTGGAGATGGAAAACTAAAGAAGCACATTACGGCAGAACCGGATGTGACCATTGAGAAGATTGATGAAGACACTGAATTCATTATTTTGGCAAGTGATGGTGTGTGGAAGGTGATGACAAATCAAGAGGCTTGTGACTGTATCAAGAATGTGGACGGTGCGGAAAAAGCATCTAAGAAGTTAATTAAAGAAGCTAAATCTCTAGGAAGCTATGATGATATTTCATGCATAGTTATAATGTTCTAG 816 0.4044 MEQPHKGMVTRYSDEKNNPSTRHFIHGYHLIQGQMNHGMEDYIFAQHRNLDGYDLGLYAIFDGHSGHEVAKYLRNHLFENILSEPGFWENPVQAIKKACKATDDEVLENVADSRGGSTAVAAILVNGVKLLVANVGDSRAISCKNGRANPLTVDHDPEKEKALVESRGGFVSKRPGNVPRVDGQLAMTRAFGDGKLKKHITAEPDVTIEKIDEDTEFIILASDGVWKVMTNQEACDCIKNVDGAEKASKKLIKEAKSLGSYDDISCIVIMF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01909 271 FunFam Probable protein phosphatase 2C 39 17 271 - -
Viun3g01909 271 CDD PP2Cc 24 269 IPR001932 -
Viun3g01909 271 PANTHER PROTEIN PHOSPHATASE 20 269 IPR015655 GO:0004722|GO:0006470
Viun3g01909 271 Gene3D - 23 271 IPR036457 -
Viun3g01909 271 SMART PP2C_4 15 269 IPR001932 -
Viun3g01909 271 Pfam Protein phosphatase 2C 37 263 IPR001932 -
Viun3g01909 271 ProSiteProfiles PPM-type phosphatase domain profile. 25 271 IPR001932 -
Viun3g01909 271 SUPERFAMILY PP2C-like 21 271 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01909 Viun-Chr3 14564173 14567348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01909 22 271 PP2C-type Phosphatase Gene Family AT3G15260 57.769 1.55e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01909 - - gmx:100814772 497.278