Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01908 ATGCCTCAAACAAATATGATGAAGGCCAAATCTAACTTGCATAAAAGAAAGTCATCCTTGATTAGTGATGGACATCCTTCTGCATTCAAGAAGAGAATATCAAGAAGAGGAAGCTATGTAGACTCTTTTGAAAGAAAGCAGCCAGAGGGTAACACTATTAGAGAAGAAAACTATAATGAAGATGAAGATAAAAATGTTATTGGTAAGTACATGATCAAAGAAAAAGCAGGAGGAGAATATGATGCAGTGGATGACTATCAAGATAATGCAGACTACTTACCAGAAGATAAAGGTCCAAATACTACAGAGGAGCAACCTCACAAGGGTATGGTCACAAGATACTCGGATGAAAAAAATAACCCTTCAACTCGACATTTCATCCATGGATATCACTTAATACAAGGACAGATGAACCATGGTATGGAAGACTATATTTTCGCTCAACATAGGAATCTCGATGGTTATGACTTAGGATTGTATGCAATATTTGATGGTCACTCCGGTCATGAAGTTGCAAAATACTTGCGAAACCATCTATTCGAAAATATACTGAGTGAGCCTGGTTTCTGGGAAAATCCAGTGCAAGCTATTAAGAAAGCATGCAAAGCAACGGATGATGAGGTTTTAGAAAACGTAGCTGATTCACGTGGAGGATCAACAGCAGTTGCAGCAATATTAGTCAATGGAGTAAAGCTACTGGTAGCCAATGTTGGTGATTCTAGAGCAATATCATGCAAAAATGGTCGAGCAAACCCACTTACTGTGGACCATGATCCAGAGAAGGAAAAAGCTCTTGTTGAGAGCAGAGGAGGTTTTGTGTCCAAGAGACCTGGGAATGTTCCAAGAGTGGATGGACAATTAGCAATGACAAGGGCATTTGGAGATGGAAAACTAAAGAAGCACATTACGGCAGAACCGGATGTGACCATTGAGAAGATTGATGAAGACACTGAATTCATTATTTTGGCAAGTGATGGTGTGTGGAAGAACTGGCCCCTGTATCGCAGGTGA 1011 0.3996 MPQTNMMKAKSNLHKRKSSLISDGHPSAFKKRISRRGSYVDSFERKQPEGNTIREENYNEDEDKNVIGKYMIKEKAGGEYDAVDDYQDNADYLPEDKGPNTTEEQPHKGMVTRYSDEKNNPSTRHFIHGYHLIQGQMNHGMEDYIFAQHRNLDGYDLGLYAIFDGHSGHEVAKYLRNHLFENILSEPGFWENPVQAIKKACKATDDEVLENVADSRGGSTAVAAILVNGVKLLVANVGDSRAISCKNGRANPLTVDHDPEKEKALVESRGGFVSKRPGNVPRVDGQLAMTRAFGDGKLKKHITAEPDVTIEKIDEDTEFIILASDGVWKNWPLYRR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01908 336 MobiDBLite consensus disorder prediction 89 121 - -
Viun3g01908 336 SUPERFAMILY PP2C-like 123 330 IPR036457 -
Viun3g01908 336 FunFam Probable protein phosphatase 2C 39 119 332 - -
Viun3g01908 336 ProSiteProfiles PPM-type phosphatase domain profile. 127 336 IPR001932 -
Viun3g01908 336 Pfam Protein phosphatase 2C 139 329 IPR001932 -
Viun3g01908 336 Gene3D - 125 332 IPR036457 -
Viun3g01908 336 MobiDBLite consensus disorder prediction 97 121 - -
Viun3g01908 336 CDD PP2Cc 126 330 IPR001932 -
Viun3g01908 336 MobiDBLite consensus disorder prediction 28 60 - -
Viun3g01908 336 MobiDBLite consensus disorder prediction 1 60 - -
Viun3g01908 336 PANTHER PROTEIN PHOSPHATASE 85 329 IPR015655 GO:0004722|GO:0006470
Viun3g01908 336 SMART PP2C_4 117 335 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01908 Viun-Chr3 14562082 14567185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01908 124 329 PP2C-type Phosphatase Gene Family AT2G34740 64.251 3.75e-97 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01908 - - gmx:100814772 553.903