Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01907 ATGCCTCAAACAAATATGATGAAGGCCAAATCTAACTTGCATAAAAGAAAGTCATCCTTGATTAGTGATGGACATCCTTCTGCATTCAAGCCAGAGGGTAACACTATTAGAGAAGAAAACTATAATGAAGATGAAGATAAAAATGTTATTGGTAAGTACATGATCAAAGAAAAAGCAGGAGGAGAATATGATGCAGTGGATGACTATCAAGATAATGCAGACTACTTACCAGAAGATAAAGGTCCAAATACTACAGAGGAGCAACCTCACAAGGGTATGGTCACAAGATACTCGGATGAAAAAAATAACCCTTCAACTCGACATTTCATCCATGGATATCACTTAATACAAGGACAGATGAACCATGGTATGGAAGACTATATTTTCGCTCAACATAGGAATCTCGATGGTTATGACTTAGGATTGTATGCAATATTTGATGGTCACTCCGGTCATGAAGTTGCAAAATACTTGCGAAACCATCTATTCGAAAATATACTGAGTGAGCCTGGTTTCTGGGAAAATCCAGTGCAAGCTATTAAGAAAGCATGCAAAGCAACGGATGATGAGGTTTTAGAAAACGTAGCTGATTCACGTGGAGGATCAACAGCAGTTGCAGCAATATTAGTCAATGGAGTAAAGCTACTGGTAGCCAATGTTGGTGATTCTAGAGCAATATCATGCAAAAATGGTCGAGCAAACCCACTTACTGTGGACCATGATCCAGAGAAGGAAAAAGCTCTTGTTGAGAGCAGAGGAGGTTTTGTGTCCAAGAGACCTGGGAATGTTCCAAGAGTGGATGGACAATTAGCAATGACAAGGGCATTTGGAGATGGAAAACTAAAGAAGCACATTACGGCAGAACCGGATGTGACCATTGAGAAGATTGATGAAGACACTGAATTCATTATTTTGGCAAGTGATGGTGTGTGGAAGGTGATGACAAATCAAGAGGCTTGTGACTGTATCAAGAATGTGGACGGTGCGGAAAAAGCATCTAAGAAGTTAATTAAAGAAGCTAAATCTCTAGGAAGCTATGATGATATTTCATGCATAGTTATAATGTTCTAG 1071 0.3922 MPQTNMMKAKSNLHKRKSSLISDGHPSAFKPEGNTIREENYNEDEDKNVIGKYMIKEKAGGEYDAVDDYQDNADYLPEDKGPNTTEEQPHKGMVTRYSDEKNNPSTRHFIHGYHLIQGQMNHGMEDYIFAQHRNLDGYDLGLYAIFDGHSGHEVAKYLRNHLFENILSEPGFWENPVQAIKKACKATDDEVLENVADSRGGSTAVAAILVNGVKLLVANVGDSRAISCKNGRANPLTVDHDPEKEKALVESRGGFVSKRPGNVPRVDGQLAMTRAFGDGKLKKHITAEPDVTIEKIDEDTEFIILASDGVWKVMTNQEACDCIKNVDGAEKASKKLIKEAKSLGSYDDISCIVIMF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01907 356 Pfam Protein phosphatase 2C 122 348 IPR001932 -
Viun3g01907 356 ProSiteProfiles PPM-type phosphatase domain profile. 110 356 IPR001932 -
Viun3g01907 356 FunFam Probable protein phosphatase 2C 39 102 356 - -
Viun3g01907 356 CDD PP2Cc 109 354 IPR001932 -
Viun3g01907 356 SUPERFAMILY PP2C-like 106 356 IPR036457 -
Viun3g01907 356 Gene3D - 108 356 IPR036457 -
Viun3g01907 356 SMART PP2C_4 100 354 IPR001932 -
Viun3g01907 356 MobiDBLite consensus disorder prediction 1 46 - -
Viun3g01907 356 PANTHER PROTEIN PHOSPHATASE 79 354 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01907 Viun-Chr3 14562082 14567348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01907 107 356 PP2C-type Phosphatase Gene Family AT3G15260 57.769 3.18e-103 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01907 - - gmx:100814772 593.193