Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01905 ATGCCTCAAACAAATATGATGAAGGCCAAATCTAACTTGCATAAAAGAAAGTCATCCTTGATTAGTGATGGACATCCTTCTGCATTCAAGAGAATATCAAGAAGAGGAAGCTATGTAGACTCTTTTGAAAGAAAGCCAGAGGGTAACACTATTAGAGAAGAAAACTATAATGAAGATGAAGATAAAAATGTTATTGGTAAGTACATGATCAAAGAAAAAGCAGGAGGAGAATATGATGCAGTGGATGACTATCAAGATAATGCAGACTACTTACCAGAAGATAAAGGTCCAAATACTACAGAGGAGCAACCTCACAAGGGTATGGTCACAAGATACTCGGATGAAAAAAATAACCCTTCAACTCGACATTTCATCCATGGATATCACTTAATACAAGGACAGATGAACCATGGTATGGAAGACTATATTTTCGCTCAACATAGGAATCTCGATGGTTATGACTTAGGATTGTATGCAATATTTGATGGTCACTCCGGTCATGAAGTTGCAAAATACTTGCGAAACCATCTATTCGAAAATATACTGAGTGAGCCTGGTTTCTGGGAAAATCCAGTGCAAGCTATTAAGAAAGCATGCAAAGCAACGGATGATGAGGTTTTAGAAAACGTAGCTGATTCACGTGGAGGATCAACAGCAGTTGCAGCAATATTAGTCAATGGAGTAAAGCTACTGGTAGCCAATGTTGGTGATTCTAGAGCAATATCATGCAAAAATGGTCGAGCAAACCCACTTACTGTGGACCATGATCCAGAGAAGGAAAAAGCTCTTGTTGAGAGCAGAGGAGGTTTTGTGTCCAAGAGACCTGGGAATGTTCCAAGAGTGGATGGACAATTAGCAATGACAAGGGCATTTGGAGATGGAAAACTAAAGAAGCACATTACGGCAGAACCGGATGTGACCATTGAGAAGATTGATGAAGACACTGAATTCATTATTTTGGCAAGTGATGGTGTGTGGAAGGTGATGACAAATCAAGAGGCTTGTGACTGTATCAAGAATGTGGACGGTGCGGAAAAAGCATCTAAGAAGTTAATTAAAGAAGCTAAATCTCTAGGAAGCTATGATGATATTTCATGCATAGTTATAATGTTCTAG 1116 0.3898 MPQTNMMKAKSNLHKRKSSLISDGHPSAFKRISRRGSYVDSFERKPEGNTIREENYNEDEDKNVIGKYMIKEKAGGEYDAVDDYQDNADYLPEDKGPNTTEEQPHKGMVTRYSDEKNNPSTRHFIHGYHLIQGQMNHGMEDYIFAQHRNLDGYDLGLYAIFDGHSGHEVAKYLRNHLFENILSEPGFWENPVQAIKKACKATDDEVLENVADSRGGSTAVAAILVNGVKLLVANVGDSRAISCKNGRANPLTVDHDPEKEKALVESRGGFVSKRPGNVPRVDGQLAMTRAFGDGKLKKHITAEPDVTIEKIDEDTEFIILASDGVWKVMTNQEACDCIKNVDGAEKASKKLIKEAKSLGSYDDISCIVIMF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01905 371 SUPERFAMILY PP2C-like 121 371 IPR036457 -
Viun3g01905 371 CDD PP2Cc 124 369 IPR001932 -
Viun3g01905 371 Pfam Protein phosphatase 2C 137 363 IPR001932 -
Viun3g01905 371 PANTHER PROTEIN PHOSPHATASE 92 369 IPR015655 GO:0004722|GO:0006470
Viun3g01905 371 MobiDBLite consensus disorder prediction 87 106 - -
Viun3g01905 371 SMART PP2C_4 115 369 IPR001932 -
Viun3g01905 371 FunFam Probable protein phosphatase 2C 39 117 371 - -
Viun3g01905 371 Gene3D - 123 371 IPR036457 -
Viun3g01905 371 MobiDBLite consensus disorder prediction 36 57 - -
Viun3g01905 371 MobiDBLite consensus disorder prediction 1 57 - -
Viun3g01905 371 ProSiteProfiles PPM-type phosphatase domain profile. 125 371 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01905 Viun-Chr3 14562082 14567348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01905 122 371 PP2C-type Phosphatase Gene Family AT3G15260 57.769 4.02e-103 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01905 - - gmx:100814772 615.535