Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01884 ATGGCAGCAGAACTTGTTGGTGGCGCTCTCCTTTCATCTTTCGTTAATGTTGCATTTGACAGGCTGGCTTCCCGTGAAGTTGTAGACTTCTTTCGTGGAAGAAAACTTGATGAGAAGCTGCTCCACAATTTGAACATCATGTTGCACTCCATCAATTCTCTCGCTGATGATGCAGAACAGAAGCAGTTCAGAGACCCACATGTGAAAGCATGGCTTTTTGCTGTCAAAGAGGCCGTGTTTGATGCCGAGGATCTCTTGGATGAAATAGACTATGAACACACCAGATGTGAAGTGGAAGCTGAAGCTGGATCTGAACCTCAAACCATCACTTACAAGGTATCAAACTTCTTCAATGCTACTTTCAGTTCCTTTAACAAGAAAATTGACTCAAGGTTGAAAGAAGTCCTTAAAAAATTAGAATATCTTGCAAGGCAAAAGGGGGCTCTTGGTTTGAAAGAGTGTACTTATTCTAGTGTTGGATCTGGTAGTAATATCTCACAGAAATTGCCATCAACTTCTTTGGTGGTTGAAAGTGTTATTTATGGCAGAGATGCTGACAAAGAAATCATCTTTAATTGGCTCACGTCCGAAACTAACAGTCGTAACCAACCATCAATACTTTCTATTGTGGGCATGGGTGGGTTGGGTAAGACCACACTCGCCCAACATGTTTACAATGACCCAAAGCTGGATAATGCTAAATTTGATATCAAACTATGGGTCTGTGTTTCGGATCATTTTGATGTTTTGACCGTCACAAAAACAATTCTTGAGACAATCGATAACAAAAAAGATGATAGTGGGAACCTAGAAATGGTTCACAAAAAACTAAAAGAAAAATTGTCAGGAAGGAAATTTCTTCTTGTTTTGGATGATGTTTGGAATGAAAAACAAAAGGAATGGGAAGCTGTGCGAACTCCTCTTAGCTATGGGGCTCCAGGAAGTAGAATTCTTGTCACAACACGTGCTGAGAAAGTTGCTTCTAACATGAGGTCTGAAGTGCATCGTCTAAAACAATTACAAGAGGATGAATGCTGGAAAGTTTTCACAAAACATGCACTAAAAGATGATGATCTTGAATTGAACGATGAGCAAAAGGAGATTGGTAGAAGGATAGTTGAGAAATGCAAAGGATTACCTCTTGCTTTGAAAACAATTGGAAGTCTTTTGCACACAAAGTCATCCATTTCATATTGGAAAAGTGTGTTGGTAAACGACATATGGGACTTAACAAAAGAAGACAGTGAAATTATCCCTGCGCTATTTTTGAGTTATCACTACCTTCCTTCTCATCTTAAAAGGTGTTTTGCTTATTGTGCCATATTTCCCAAAGATTATGAGTTTCTAAAGAAGGAGTTAATTTTTTTGTGGATGGCAGAAAACATTTTACAGTGCCCTCAACAAATCAGACATCCAGTAGAAGTTGGTGAAGAGTATTTCAATGATCTATTGTCAAGGTCTTTCTTTCAACAATCAAGTGCCAAAAGGCATTTCGTCATGCACGACCTTCTGAATGATTTGGCAAAACATGTTTGTGCTGATTTCTGTTTTAGGTTGAAATTTGATAAAGGAAAATGTATACCTAAAGCAACTCGTCATTTCTCATTTGCATTTGATGACGTCAAATGTTTTGATGGTTTTAGGAGTTTAACTGAGGCTGAAAAACTGCGTTCCTTTATTCCAATAACAAAAATCGGGAAACATTTTTACCTTGATTATAGTTGGAAATTCAAGATTTCGATACATGATTTGTGCTCCAAGATGAAGTTTTTACGTGTCTTATCTTTCGATTGTTGCTCGGACATTAGAGAGGTCCCATGTTCAGTTGGTGATCTTAAACATCTTCGTTTGTTAGATCTTTCGAGAACCGAGATACAAAAACTACCTGACTCAACATGTTTGCTCTATAACTTACTAATATTGAAGTTGAACTATTGTTCAAATTTGGAAGAGTTGCCCTCAAATTTGCATAAGCTCACCAAATTGTGTTGCCTGGAATTTAAAAGAACAAAAGTGACAAAGATGCCAATGCATTTTGGAGAATTGAAGAATATTCAAGTACTGAATACTTTTATTGTAGATAGAACTAGTGAGTTCAATTCTAAGCAGCTAGGACGACTCAATCTTCATGGAAGGTTATCAATAAAGGAGTTGCAGAATATTATAAATTCATCGGATGCATTAGTAATGGATTTGAAAAATAAAACACACCTGGTGACGTTGAAGTTAAAATGGAATAAAAACCATATCCTTGATAATCCAAGGAAAGAAAAGAAAGTATTGGAGAATCTACAACCTTCCAAATACTTGGAGACTTTAGGAATCAACAACTATGGTGGTATGGAATTTCCAAACTGGGTGTTCGATAATTCATTACCAAATTTGGTGTTCTTACAGTTAAAGAACTGTAAATATATCTTATGTTTGCCACCCCTTGGACTTTTGTCATCTTTGAAGACCCTAAAAATTATAGGCCTTGATGGAATAGTGAGCATTGGTGCTGAGTTCTATGGAGGAAGCGACTCCTCTTCATTTAAGTCCTTGGAAAGATTGGAATTCTACAACATGAAAGAATGGGAAGAATGGGAATGTAAAACTGCTTCTTTTCCGCGACTTCAACGTCTTTCTGTGAACAAATGTCCCAAGCTGAAAGGCCTGCCAGAACAACTTCATTTAAAGAAACTAATTATTTGTTCATGCGAAATACTCACCATTAGCGGACATAGCATGGACCCATCGACTCTTGAAGTCTTGAAAATTTATTCGTGTCCACTTACAAATGTTCCCATTACCCATTACGACTTCCTTGAAGAAATGGAGATTGATGGAGGTTGTGACTTTCTTACGACCTTTCCTCTAGATTTCTTTCCAAAACTCCGTTTTCTTAAACTGTCCAGGTGCCAAAACCTACAAAGAATTTCACATGAGCATACTCATGATCATCTCAAGTATCTCATAGTTGAGAAGTGCCCTCAATTTGAATCATTTCCCAGTGAAGGATTATCTGCACCGTGGCTACAAGGAATTGAAATTCGAGGAGCGAAGAATTTGAAGTTGTTACCGAAACACATGCAAACCCTACTTCCATCTCTTACTGACCTGCATATAATTGACTGTCCACAAGTGGAGATGTTCCCAGATGGATTTCCATCAAATGTAAAATATGTGTCTCTTTCAAGTTTAAAACTCATTGCCTCCCTGAGTGAGATCTTGGAGACTAACACATGTCTTAAAAGCTTGAGTATTGAAAAGGTGGATGTGGAATGTTTTCCTGATGAAGTTTTGCTGCCAAGATCTCTTACCTCTCTATGCATATGTGATTGCCCAAATCTTAAGAAGATGGATTACAAGGGTCTTTGTCACCTCTCCTCTCTCACACTTATTGATTGTCCCAACCTTCAATGCTTACCAGAGGAGGCTATGCTCAAATTCATCTCTTCTCTTACAGTAAGAGGTTGTCCATTGCTCAAGCAGTATTGTCAGAATCCAGAAGGCAAAGACTGGAGAAAGGTTGCTCACATTGAAGAACTGCTTATTGAGTAA 3543 0.3791 MAAELVGGALLSSFVNVAFDRLASREVVDFFRGRKLDEKLLHNLNIMLHSINSLADDAEQKQFRDPHVKAWLFAVKEAVFDAEDLLDEIDYEHTRCEVEAEAGSEPQTITYKVSNFFNATFSSFNKKIDSRLKEVLKKLEYLARQKGALGLKECTYSSVGSGSNISQKLPSTSLVVESVIYGRDADKEIIFNWLTSETNSRNQPSILSIVGMGGLGKTTLAQHVYNDPKLDNAKFDIKLWVCVSDHFDVLTVTKTILETIDNKKDDSGNLEMVHKKLKEKLSGRKFLLVLDDVWNEKQKEWEAVRTPLSYGAPGSRILVTTRAEKVASNMRSEVHRLKQLQEDECWKVFTKHALKDDDLELNDEQKEIGRRIVEKCKGLPLALKTIGSLLHTKSSISYWKSVLVNDIWDLTKEDSEIIPALFLSYHYLPSHLKRCFAYCAIFPKDYEFLKKELIFLWMAENILQCPQQIRHPVEVGEEYFNDLLSRSFFQQSSAKRHFVMHDLLNDLAKHVCADFCFRLKFDKGKCIPKATRHFSFAFDDVKCFDGFRSLTEAEKLRSFIPITKIGKHFYLDYSWKFKISIHDLCSKMKFLRVLSFDCCSDIREVPCSVGDLKHLRLLDLSRTEIQKLPDSTCLLYNLLILKLNYCSNLEELPSNLHKLTKLCCLEFKRTKVTKMPMHFGELKNIQVLNTFIVDRTSEFNSKQLGRLNLHGRLSIKELQNIINSSDALVMDLKNKTHLVTLKLKWNKNHILDNPRKEKKVLENLQPSKYLETLGINNYGGMEFPNWVFDNSLPNLVFLQLKNCKYILCLPPLGLLSSLKTLKIIGLDGIVSIGAEFYGGSDSSSFKSLERLEFYNMKEWEEWECKTASFPRLQRLSVNKCPKLKGLPEQLHLKKLIICSCEILTISGHSMDPSTLEVLKIYSCPLTNVPITHYDFLEEMEIDGGCDFLTTFPLDFFPKLRFLKLSRCQNLQRISHEHTHDHLKYLIVEKCPQFESFPSEGLSAPWLQGIEIRGAKNLKLLPKHMQTLLPSLTDLHIIDCPQVEMFPDGFPSNVKYVSLSSLKLIASLSEILETNTCLKSLSIEKVDVECFPDEVLLPRSLTSLCICDCPNLKKMDYKGLCHLSSLTLIDCPNLQCLPEEAMLKFISSLTVRGCPLLKQYCQNPEGKDWRKVAHIEELLIE 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01884 1180 FunFam Probable disease resistance protein At1g63360 425 510 - -
Viun3g01884 1180 Gene3D Ribonuclease Inhibitor 1033 1164 IPR032675 -
Viun3g01884 1180 PRINTS Disease resistance protein signature 610 626 - -
Viun3g01884 1180 PRINTS Disease resistance protein signature 376 390 - -
Viun3g01884 1180 PRINTS Disease resistance protein signature 206 221 - -
Viun3g01884 1180 PRINTS Disease resistance protein signature 280 294 - -
Viun3g01884 1180 SUPERFAMILY L domain-like 891 1172 - -
Viun3g01884 1180 Gene3D Ribonuclease Inhibitor 694 890 IPR032675 -
Viun3g01884 1180 Gene3D Ribonuclease Inhibitor 891 1028 IPR032675 -
Viun3g01884 1180 FunFam Probable disease resistance protein At1g61300 164 335 - -
Viun3g01884 1180 Coils Coil 715 735 - -
Viun3g01884 1180 Gene3D - 340 423 IPR042197 -
Viun3g01884 1180 Gene3D - 21 139 - -
Viun3g01884 1180 Gene3D Ribonuclease Inhibitor 573 693 IPR032675 -
Viun3g01884 1180 Pfam Rx N-terminal domain 11 104 IPR041118 -
Viun3g01884 1180 SUPERFAMILY L domain-like 499 929 - -
Viun3g01884 1180 PANTHER DISEASE RESISTANCE PROTEIN RP 55 883 IPR044974 GO:0006952
Viun3g01884 1180 ProSiteProfiles Leucine-rich repeat profile. 614 635 IPR001611 GO:0005515
Viun3g01884 1180 Gene3D - 163 339 IPR027417 -
Viun3g01884 1180 Gene3D - 424 511 IPR036388 -
Viun3g01884 1180 Pfam NB-ARC domain 185 404 IPR002182 GO:0043531
Viun3g01884 1180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 439 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01884 Viun-Chr3 14408885 14412985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01884 207 393 WRKY Transcription Factor Family AT5G45050 27.083 1.22e-07 54.3