Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01876 ATGGGGGCTGAAATGCAAAATGAAGGAGGGGCTGAAACCAGGGGGCTCAAACGCTGCCAGATATGGGTCGCTTCTTCTTCCTCGTCGGCGCCGACAACACCAACCTCCATCATTGAAAAAGCTGGTGTGGCTCACAAGATCAACTTCAAAGAAGGACATGTTCTTCCTTTTCTGACGAGCTTCTTAAAAAATGAGAATAAGAAGGGAACGTTCAATTTTGTTTTTGTGGATGGTGATAAGAACAATTACTTGAACTATCACAAGAGAGTAATTGATCTAGTGAAAGTGGGAGGTCTGATTGGATATGACAACACCCTATGGGTTGGATCTGTGGCTGCGCCTCCTGATGCATTGTTGATGGATTACATTAAGCCTCTTCGCATCTATGTGTTGGAGCTGAACAAGTACTTGGGACAAGATTCAAGGATCGAGATTTTCCAGCTCTCCGTGGGTGATGAGATTACCTTATGTCGCCGCATCATCTGA 486 0.4506 MGAEMQNEGGAETRGLKRCQIWVASSSSSAPTTPTSIIEKAGVAHKINFKEGHVLPFLTSFLKNENKKGTFNFVFVDGDKNNYLNYHKRVIDLVKVGGLIGYDNTLWVGSVAAPPDALLMDYIKPLRIYVLELNKYLGQDSRIEIFQLSVGDEITLCRRII 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01876 161 Pfam O-methyltransferase 35 160 IPR002935 GO:0008171
Viun3g01876 161 Gene3D Vaccinia Virus protein VP39 20 161 IPR029063 -
Viun3g01876 161 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 160 IPR002935 GO:0008171
Viun3g01876 161 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 37 159 IPR029063 -
Viun3g01876 161 PANTHER O-METHYLTRANSFERASE-RELATED 35 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01876 Viun-Chr3 14295108 14295780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01876 37 160 Monolignol Biosynthesis Gene Families AT4G34050 64.516 3.89e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01876 K00588 - gmx:100305498 204.912