Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01849 ATGGCTACCATTTCTTCAATTTGCAACCTCTTTCTCCCCATAATTTTATCATTATTCCCCAGAACACTGTGTGCAACAGTGCTACAAGACCTCAAAAACTTACATCAACCCCCAGCCTTTAACTCTACAATTCTCTCAAACTGTCTCAACAATCCATCTCTTAGGTACTGCACTTCATCTCCAATCATGGACTTTGATGAAATATTCAAGTTTACCATTGTTGCAAGCCATCTCTGCAATGAATCCAACAACCCCAATTGTGTAGAGTCATTCCCCAAAGTTGATCTTAGAAACCGTCCAAATATTGCACCACTTTATTTGTCCTTCGATTTCTTTTGGAAATATTGCCCCTTGAGCATCATGTCCATTGATTTGTCCAACAATTCTATGAAGGGTGGTTTTCCAACCGAAGTTTTCTATTGCACCCAAATCCAGTCTCTTGATCTGAGTATCAATGCATTTTCTGGGGACATTCCAATTCAGAGTTTCTCTTCCTTCACCAACCTCACTTTTCTCAACCTCTCCTATAATGGCTTTTCAGAGAGTAAACTGTCAGATTCCCAGTTCTTCAAAAGGTTCAATTCTTCTAGTTTTCTTCATTCTGGTGCTCTCTTGGATCCAAAAAAGTTTACTGTGAAGGCTGTTGTTCTGTTAGTTTGCTTTCCCATCCTTGTCATTTTTATGGTAATTTCCTTGGTATGGCTTTGTTTCCAAAGGCCTGATTTTCTCCCAAGGAAACTTCAAAGAGGTTGGAGGTTTACACCAGCAATTCTAAAAGCAGCAACTGATGGTTTTTCACATAAGAATTTGGTGGGGATGAGTGATGTTGTTCATATCTACAAAGGGACATTGAGAGATGGTACTGAAGTGAAAATTGAGATGTACTGGGATGATATACCAAGGGACAGTTACCGTAGATTTGTTGATGAATGCAATATTCTGTCTAAGTTACACCACAAAAACCTTGTCAGAGCTGGGTGGTGTAAGAGCAGAAAATTCAGGGCCATTATCACAGAATGGACGAGAGAAGAAAACGTTGAAATGTGGTTATCAGGGTCAAGTCCATCATGGAATCATAGAGTGAAAGTGTTAATGGGGATTGTAGAATGCATGCGCTATATGCAGAAGGAATGGCCTGAAATTGACTATGAACTCGACACAAGTAGTATTTTGCTGTCCGACAATATGGAACCATTAATTTCAAGGTTCAAAGTTGGAGATCACAACAACAATGAAAGAAAGATACATAGGTTTGGAGTATTTGTGCTGGAGCTGATACTAGATAAGAAGGTTCAAGAGGAGTTTGATGGAGATGATGCTGAATTTGTTAGGTACATAAGAACACTTAATTCTGCAGATTTGCTGCAGATTATTGATGAGAGAATGGAAATAACTGAAGCAAATTTTCATCAAGTTAAGCAGGCACTGTATTTGGGATTAATGTGCGTAGATCAATCGAACAGTGAGAAGCGAAGCTTGGGCATGATACTTAACACTGTAGCAAGAGCCTACAAAACATGCTTGTTCAAACCAATTAAGTAG 1542 0.3904 MATISSICNLFLPIILSLFPRTLCATVLQDLKNLHQPPAFNSTILSNCLNNPSLRYCTSSPIMDFDEIFKFTIVASHLCNESNNPNCVESFPKVDLRNRPNIAPLYLSFDFFWKYCPLSIMSIDLSNNSMKGGFPTEVFYCTQIQSLDLSINAFSGDIPIQSFSSFTNLTFLNLSYNGFSESKLSDSQFFKRFNSSSFLHSGALLDPKKFTVKAVVLLVCFPILVIFMVISLVWLCFQRPDFLPRKLQRGWRFTPAILKAATDGFSHKNLVGMSDVVHIYKGTLRDGTEVKIEMYWDDIPRDSYRRFVDECNILSKLHHKNLVRVXGWCKSRKFRAIITEWTREENVEMWLSGSSPSWNHRVKVLMGIVECMRYMQKEWPEIDYELDTSSILLSDNMEPLISRFKVGDHNNNERKIHRFGVFVLELILDKKVQEEFDGDDAEFVRYIRTLNSADLLQIIDERMEITEANFHQVKQALYLGLMCVDQSNSEKRSLGMILNTVARAYKTCLFKPIK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01849 514 Gene3D Phosphorylase Kinase; domain 1 243 341 - -
Viun3g01849 514 SUPERFAMILY Protein kinase-like (PK-like) 246 434 IPR011009 -
Viun3g01849 514 ProSiteProfiles Protein kinase domain profile. 265 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g01849 514 Gene3D Ribonuclease Inhibitor 71 193 IPR032675 -
Viun3g01849 514 Pfam Protein tyrosine and serine/threonine kinase 271 405 IPR001245 GO:0004672|GO:0006468
Viun3g01849 514 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 101 192 - -
Viun3g01849 514 SUPERFAMILY L domain-like 77 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01849 Viun-Chr3 13713987 13715718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01849 122 508 Receptor kinase-like Gene Family AT5G45780 22.566 6.99e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Viun3g01849 PK_Tyr_Ser-Thr 2.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01849 - - gmx:100779045 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01849 3 13713987 13715718 Viun3g01849 3 13713987 13715718 ECH