Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01845 ATGTGCAACAACAACATCCTTGGCCCAATTATGGAGAACTATCAAGGTGATTTGAGTGACATAATTCGTGCTAGTGGTGCATCATATGGCAGTTGCAGCATGGGAACTTCATCGTCTAAAGCTTGTGCTCCTTTTTCTCTCGATCACTGGCAGTTTTCTTCTGTTTTGGAAGGGTTTGATGGAAACTTTGGTGATCCATTCTCAAACACGAGAGATCCCTTTCTACACCAGCTCACAACAAGTTCTGCAGAAATTAGCAGTTCTGGGGCATTGGAAGAAGCAACCTTTTTCGGTGGTGGGGTTGCTGCTAGTAGCAGTAGTAGTAGAAACAGTTGTGTTTTGAAAGAAACGATTTTTGAGGATGATGACACGAGAAGGCCTTGTAATAGCATATTGGAAAACATGATTCAGATCTCTCCCCCCAATCACAAGTTACCCATGTTGCCAGTGGTGGAATCTTTGTCAAGGGCACTCAAGCCTTCTGGTGTGGTTTTAGGTGATACCATGATTAATGTGAAGAACTCTGAAGATGATTGCTTGGTGGGTAACAGCAACACAAAAGAAATGCAGATCTCACCTCCTCGGAATCCAGGTTTTAAGAGAAGGAAGAGTCCGGCAAAGAAATCTATCTGTGTTCCTGCACCAGCTGCACCAAACAGCAGACAAAGTGGAGAGGTAGTCCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCTCAAAGGGTTGTCCTGCAAGAAAACAAGTTGAGAGAAGCAGAACAGATCCAAACCTGTTGGTGATTACTTACACGTCAGAGCACAACCATCCATGGCCAACTCACAGAAATGCTCTCGCTGGTTCTTCTCGATCTCAACCTTCATCCAAGGGCAACAACAACTTTGATGCTTCAAAGAATGAAGAAACCAGTCCCCAACACGAGGAAGAGCAGCATGAAGAGAGCAACAGTGACAGCAATAATGTGAATAACAGTGCATGTGTTCAGGAAGATGGAGAATTCAGTGACATTGGACTCCCTTACAGTGCATGTGTTCATCAGGGTTTGTTTGCAGAGTTTGGAGAAATAGAAAAAGCTCACTCACTTAACCTAATGTTTCCACCACAAGGTTTTGATGATCACCAAAGGGAATCCAACGCTTTAGATTCATTCCATATCTTTGACTGGAGCGCTGATATGTAA 1230 0.4374 MCNNNILGPIMENYQGDLSDIIRASGASYGSCSMGTSSSKACAPFSLDHWQFSSVLEGFDGNFGDPFSNTRDPFLHQLTTSSAEISSSGALEEATFFGGGVAASSSSSRNSCVLKETIFEDDDTRRPCNSILENMIQISPPNHKLPMLPVVESLSRALKPSGVVLGDTMINVKNSEDDCLVGNSNTKEMQISPPRNPGFKRRKSPAKKSICVPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRTDPNLLVITYTSEHNHPWPTHRNALAGSSRSQPSSKGNNNFDASKNEETSPQHEEEQHEESNSDSNNVNNSACVQEDGEFSDIGLPYSACVHQGLFAEFGEIEKAHSLNLMFPPQGFDDHQRESNALDSFHIFDWSADM 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01845 409 MobiDBLite consensus disorder prediction 281 342 - -
Viun3g01845 409 FunFam probable WRKY transcription factor 14 202 282 - -
Viun3g01845 409 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 340 IPR044810 GO:0003700
Viun3g01845 409 Gene3D WRKY domain 217 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g01845 409 SMART WRKY_cls 228 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g01845 409 MobiDBLite consensus disorder prediction 317 332 - -
Viun3g01845 409 MobiDBLite consensus disorder prediction 181 204 - -
Viun3g01845 409 SUPERFAMILY WRKY DNA-binding domain 226 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g01845 409 ProSiteProfiles WRKY domain profile. 223 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g01845 409 MobiDBLite consensus disorder prediction 281 316 - -
Viun3g01845 409 Pfam WRKY DNA -binding domain 230 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01845 Viun-Chr3 13669525 13673280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01845 11 297 WRKY Transcription Factor Family AT2G34830 48.377 1.28e-75 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun3g01845 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01845 - - vra:106752855 681.789