Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01830 ATGGCGTCGTCGAAGGTTGTCTCGACGAATCCGGATCTGCCACGCGACTCTTCTATATCTCCCCTTTCCTCTATTCTCCTCTCCGATCTGCACCACTCAACCTCCATGGACGACCTTCTCAAGTCCATCACCCCTTCCGCCGCCAAGACCGTCGATGATGTCTGGAAGGAGATCGTCGCCGGCGCTCACCCCCACCACCCCGCCGCCGCCGTCTCCGGAGACGGAAATGCCGCCACCGTCAACGCCACCGCCCCAGAGGGCTACGAGGCTATTACCCTGGAGGATTTCCTCACCAAGGCCGGCGCCGTCAGAGAGGAAGACGTGAGAGGGGTTCTGCCCCCTTCTTCTTCCTCTCTCCCCTTTCCTCTCCCTCTTCCCGCCCCCGAAGGCTCCTCCTCCTCCGTTGAGCCCTTTGGAAACGGCGTTGCGCCCGCCAATTCGGTTCCCAAAGGGAAGAGAAGGGTCGTGGAGGAACCTGTGGACAAGGCCACGCTTCAGAAACAGAGGAGGATGATCAAGAATCGAGAGTCCGCTGCCAGGTCTCGGGAACGCAAACAGGCTTATACATCGGAGCTTGAGTATCTGGTTCACCAGCTGGAACAAGAGAATGCCCGGTTAGTTAACGAAGAGGCTGAAATGAGAAGGCAGAGGAAAAAGCAGCTCATGGAGTACATCATTCCAGTTGAAGTGATGCCTAAACCCAGAAAAAAACTTCGGAGAGTAAATTCAGCTCAATCATTGTGA 744 0.5645 MASSKVVSTNPDLPRDSSISPLSSILLSDLHHSTSMDDLLKSITPSAAKTVDDVWKEIVAGAHPHHPAAAVSGDGNAATVNATAPEGYEAITLEDFLTKAGAVREEDVRGVLPPSSSSLPFPLPLPAPEGSSSSVEPFGNGVAPANSVPKGKRRVVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLVNEEAEMRRQRKKQLMEYIIPVEVMPKPRKKLRRVNSAQSL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01830 247 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 165 222 - -
Viun3g01830 247 MobiDBLite consensus disorder prediction 1 20 - -
Viun3g01830 247 Gene3D - 165 221 - -
Viun3g01830 247 SMART brlzneu 162 226 IPR004827 GO:0003700|GO:0006355
Viun3g01830 247 Pfam bZIP transcription factor 163 220 IPR004827 GO:0003700|GO:0006355
Viun3g01830 247 SUPERFAMILY Leucine zipper domain 167 215 IPR046347 GO:0003700|GO:0006355
Viun3g01830 247 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 169 184 IPR004827 GO:0003700|GO:0006355
Viun3g01830 247 Coils Coil 189 219 - -
Viun3g01830 247 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 216 IPR004827 GO:0003700|GO:0006355
Viun3g01830 247 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 30 242 IPR043452 GO:0003700|GO:0045893
Viun3g01830 247 MobiDBLite consensus disorder prediction 109 137 - -
Viun3g01830 247 CDD bZIP_plant_BZIP46 166 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01830 Viun-Chr3 13480079 13483179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01830 49 243 bZIP Transcription Factor Family AT5G44080 41.148 8.34e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun3g01830 bZIP_1 1.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01830 K14432 - gmx:100101890 265.388