Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01818 ATGCGTCCACCGCGAAAGAAGGTCAATTTTCGCTCCGGCGACAAGGTCGAGGTGTGTAGCAATGAGGAGGGCTTCTTCGGCTCCTACTACCTCGCCACCGTCGTCTCGCCTCTCGACAACGGCCTATACGTCGTACGCTATGACACGCTGCTCGAAGACGACGAGTCCAAACCGCTCACGCTAACCGTCTTTCCCCGAGAGCTCCGCCCTAAGCCTCCGCGCGTCGCCACCGCCTCTTCCTTCGCGCTCTACCAGCGCGTCGACGCCTTCGACAACGACGGCTGGTGGGTCGGCGAAATCACCGGCAAAGTCGACGTCGACCGCTACTATGTATACTTTTCCACCACTCACGAGGAGATCGTGTACCCCGCCTCCGCAATTAGGGTTCACCAGGAGTGGATCAACGGCCAATGGATTCGCTCCAATTGA 429 0.5921 MRPPRKKVNFRSGDKVEVCSNEEGFFGSYYLATVVSPLDNGLYVVRYDTLLEDDESKPLTLTVFPRELRPKPPRVATASSFALYQRVDAFDNDGWWVGEITGKVDVDRYYVYFSTTHEEIVYPASAIRVHQEWINGQWIRSN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01818 142 CDD Tudor_Agenet_AtDUF_rpt1_3 10 73 - -
Viun3g01818 142 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 140 - -
Viun3g01818 142 Gene3D - 1 85 - -
Viun3g01818 142 Pfam Agenet domain 13 73 IPR008395 -
Viun3g01818 142 SMART agenet_At_2 79 135 IPR014002 -
Viun3g01818 142 SMART agenet_At_2 8 76 IPR014002 -
Viun3g01818 142 CDD Tudor_Agenet_AtDUF_rpt2_4 85 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01818 Viun-Chr3 13411685 13412413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01818 20 133 PHD Transcription Factor Family AT5G58610 31.343 9.75e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01818 - - vra:106753183 254.218