Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01817 ATGGTTACATGGAGCGTACCCGAGAGAAACAGACATAAGGGGAAACTTATAAGAGAAACACCTTTCAACGATGAGAGCAAGGGGAACAATGAAGGCAGTAGCAAAGATGAATCGATTGCATATGCAGCTGTTAACGTCATCTACAAGCTAGCCATAAACGATGGCATGAGCATGAGGGTGGTCACGGCCTATCGTCTCCTTTTTGCTTCGCTTTTCACTATTCCCGTTGCTCTTATCTATGATAGAAAGACGAGGTCAAAGATTACTTGGAAGGTGCTTTTCTTGGGATTCCTGTGTGGATTGTTTGGAGGAAGTTTATTCAGTAACTCTTACCTTGTTGCGATGGATTTAACATCAGCATCGTTTATGTTGGCTATGATCAATCTTACTCCTGCCATTACCTTCATTATGGCCTTATCCTGCGGATTGGAAAAGTTAAATTTGAAAGTAGCAGAAGGGAGGGCGAAGGTGATAGGCACCATAATTGGAATTAGTGGGGCAATGTTGGTGACCTTTGTGAAAGGCACAGAAATTAATATTTGTTCCTTCAAAATCAACCTTATGCATACACATCACAACCCATCATCACCCCATCAGTTTCGAAATAAATTGTTGGGAGTTCCATTGGCCATTCTCAGCTGCTGCAGTTATTCTCTGTGGTATATACTACAGGCTAAATTGAATGAAGAATACCCAAATTCAAATTCAAGCACAGCTATAATGAACACAATGGGAGCACTGCAGGCCACCATTTTCACTCTGTGTGTCGATAGGGATTGGAAGCAGTGGAAGCTGGGTTTCAATATCAGGCTTCTAACTGCAGCTTATTCGGGAATTGTGGCCTCTGGAATAATGGTTGTGATCATTGCGTGGTGCATAAAGAAGAGAGGTCCTCTATTTGTGTCTATTTTCAGTCCTCTACAGCTTGTGCTGGTGGATATAGCTGCATATTTTATGTTAGATGAGAAATTATATTTAGGAAGTGTAGTTGGAGCAGTGATGATCGTGTGCGGTTTATACGTGGTGCTTTGGGGTAAAGCCCAAGAATTGAAAAAGAAGAAGTCTGAATTAGTGTCATTAGAAAACACGACCAGAGGAGAGTTCGAAAATGTTGAGGTTGTAAGCTCAGCACCTAGGTCACAACAACCATGA 1152 0.4184 MVTWSVPERNRHKGKLIRETPFNDESKGNNEGSSKDESIAYAAVNVIYKLAINDGMSMRVVTAYRLLFASLFTIPVALIYDRKTRSKITWKVLFLGFLCGLFGGSLFSNSYLVAMDLTSASFMLAMINLTPAITFIMALSCGLEKLNLKVAEGRAKVIGTIIGISGAMLVTFVKGTEINICSFKINLMHTHHNPSSPHQFRNKLLGVPLAILSCCSYSLWYILQAKLNEEYPNSNSSTAIMNTMGALQATIFTLCVDRDWKQWKLGFNIRLLTAAYSGIVASGIMVVIIAWCIKKRGPLFVSIFSPLQLVLVDIAAYFMLDEKLYLGSVVGAVMIVCGLYVVLWGKAQELKKKKSELVSLENTTRGEFENVEVVSSAPRSQQP 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01817 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 347 - -
Viun3g01817 383 Pfam EamA-like transporter family 39 171 IPR000620 GO:0016020
Viun3g01817 383 Pfam EamA-like transporter family 205 343 IPR000620 GO:0016020
Viun3g01817 383 PANTHER WAT1-RELATED PROTEIN 39 350 IPR030184 GO:0016020|GO:0022857
Viun3g01817 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 64 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01817 Viun-Chr3 13394841 13403648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01817 41 380 Nodulin-like Gene Family AT1G25270 40.000 4.88e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01817 - - gmx:100803545 476.092