Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01816 ATGAAGAACCTAGTACAAGACTTAAAGCCTGTGGTGCTGATGGTATTGGTTCAAATTGCATATTCTTCTGTGAATGTGCTCTATAAGCTCGCCATAAATGATGGAATGAGCATTAGGATTGTCACTGCATATCGTCTTATTTTTGCAGTAGCTTTCACTTTTTCTCTTGCTCTTATTTTCGAAAGAAAGAACAGACCAAAGTTGACATGGAGGGTGCTTTTCATGTCATTTTTTAGTGGCCTATTTGGTGCAAGTTTATTGCATAATCTGTTCCTGGAGGCCTTGGATTTGGTGTCTGCAACATTCGCTACAGCAATTTATAATCTTGTTCCTGCAGTCACTTTTATTTTGGCTATCTCGTGCAGGTTGGAAAAGTTGAATATGAGAAGCACAGCAGGGAAGGCGAAGGTGGTGGGAACGATAATAGGAATTGGAGGGTCAATGTTGCTGACATTTTTCAAAGGGCAAGAAATTGATGTTAAGAGTTTCCACACTGCTCTTCTGCATAAAAATAATCATTCATTAACTCTGCATAATACTGACTCTAGCCATAGATTTCTGGGTGCTTTGTGTGGTTTTGGAAGCTGCTTCAGTTTTGCATTATGGCTCATCATTCAGTCTAAGATAAACAAAGAATACCCAAGTCATCACTCAAGTACTGCGTTGATGTCCTTAATGGCTGCAATACAAGCCACAGCCTTTGCCCTTTATGTTGAAAAAGACTGGAACCAGTGGAAGTTATGTTCCAGTATTAGGATTCTAACTGTGCTTTATACGGGAATCGTGGCCTCTGGATTAGTGGTTATTGCCATTGCATGGTGTGTAAAAATGAGAGGTCCAATGTTTGTATCTGTTTTCAACCCTCTCATGCTCCTGCTCGTGGCTGTCGCTGATAGCTTGATGTTAGGTGAAAACTTATATGTAGGAAGTGTGATCGGAGGCGTGCTGATTGTGTGTGGCTTGTACATGTTTCTGTGGGGTAAAAGCAAAGAAGAGAAAAAGGGGAATAAGACAGTGTCGTCAGAAATCACCCAGAAACATGAAGCAACCGAAGTAGTTGTCATGTCCACTACAACAAATAATGAGAATAGTGACTGCATTAGCAGTACCAAACCCAATTGCAAAAGTAACATAGTTGCCAATGTTTCTTGA 1152 0.4045 MKNLVQDLKPVVLMVLVQIAYSSVNVLYKLAINDGMSIRIVTAYRLIFAVAFTFSLALIFERKNRPKLTWRVLFMSFFSGLFGASLLHNLFLEALDLVSATFATAIYNLVPAVTFILAISCRLEKLNMRSTAGKAKVVGTIIGIGGSMLLTFFKGQEIDVKSFHTALLHKNNHSLTLHNTDSSHRFLGALCGFGSCFSFALWLIIQSKINKEYPSHHSSTALMSLMAAIQATAFALYVEKDWNQWKLCSSIRILTVLYTGIVASGLVVIAIAWCVKMRGPMFVSVFNPLMLLLVAVADSLMLGENLYVGSVIGGVLIVCGLYMFLWGKSKEEKKGNKTVSSEITQKHEATEVVVMSTTTNNENSDCISSTKPNCKSNIVANVS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01816 383 PANTHER WAT1-RELATED PROTEIN 9 340 IPR030184 GO:0016020|GO:0022857
Viun3g01816 383 Pfam EamA-like transporter family 9 151 IPR000620 GO:0016020
Viun3g01816 383 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Viun3g01816 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 330 - -
Viun3g01816 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01816 Viun-Chr3 13382967 13386337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01816 8 365 Nodulin-like Gene Family AT1G25270 40.111 2.33e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01816 - - gmx:100813812 616.305