Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01813 ATGAACCGTACAGTGAAAGTGGTGCAAGAGTTGAAGCCTCCATTGCTGATGATGCTGGTGCAGGTTGCATATGCTGGAAATACTGTCATTGCTAGCCTCGCCATAACTGATGGAATGAGCATTAAAGTATTCAGTGCCTACCGTCACATTTGGGGAGCTGCTATCACTGTTATTCTTGCTTTTATTTTCGAAAGAAAGAACAGACCAAAGTTGACATGGAGGGTGCTCGTGATGACATTTTTTTGCGGATTATTTGGAGGGAGTTTATTCCAGAATCTTTTTTTCACCGCGGTAGCGCTGGTATCAGCAACATATGCTAACGCTATTCTAAACATGATTCCTGTGGTCACCTTCATCCTCTCCTTCCTTTGCGGCTACGAAAAGTTAAATTTGCATACCGCAGCAGGGAAAGCTAAGGTGATGGGAACGATAATTGGAGTTAGCGGGTCAATGATGCTGTCATTCTTGAAAGGGGTAGAAATAAATATTTGGAAGAATATTGACATTAATCTTATGCATAAAAAACACAACACTCAGATAATAGCATCAGATGGAAAAGAGTGGATTGGTGTTCTATGTGGTATTGGATGTTGCTTCAGTTTTTCACTATGGCTCATCATTCAGGCTAAGCTGAGTAAGGAATATCCAAGGCACCACTCAAGTACATCGTTAATGAATTCAATGGCGGCACTACAAGCCACACTCTTTGCCCTTTGTTTTGAAAAAGATTGGAATCAATGGAAGTTACCTTCAGCTATTAGGATTTTGTCCGCACTCTATTCGGGAATTGCGGTGACCGTATTTGTGAATATTGTAACTTCATGGTGTGTACGGAAGAGAGGTCCACTATATGCATCTGTGTTCAACCCCCTTGCCCTTGTGATCGTGGCTCCTACTGCTTCCCTCTTGTTACAAAATAAACTATACCTTGGAACTGTAGTTGGCGCAGCGCTAATTGTGTGTGGGTTGTACATGGTGCTGTGGGGAAAAAGCAAAGAAATGAAACCACCAACCGATTTGGTGTCTTCGGAGACAGAATTAAGAAGGACCGAGGTTGTTGTCGTGTCTGCCAACGATAAGAATGAGCATGTTAGCAATAACCAGGTGAATAGTATAAAAGCAACACTGTAA 1131 0.4218 MNRTVKVVQELKPPLLMMLVQVAYAGNTVIASLAITDGMSIKVFSAYRHIWGAAITVILAFIFERKNRPKLTWRVLVMTFFCGLFGGSLFQNLFFTAVALVSATYANAILNMIPVVTFILSFLCGYEKLNLHTAAGKAKVMGTIIGVSGSMMLSFLKGVEINIWKNIDINLMHKKHNTQIIASDGKEWIGVLCGIGCCFSFSLWLIIQAKLSKEYPRHHSSTSLMNSMAALQATLFALCFEKDWNQWKLPSAIRILSALYSGIAVTVFVNIVTSWCVRKRGPLYASVFNPLALVIVAPTASLLLQNKLYLGTVVGAALIVCGLYMVLWGKSKEMKPPTDLVSSETELRRTEVVVVSANDKNEHVSNNQVNSIKATL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01813 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 147 - -
Viun3g01813 376 Pfam EamA-like transporter family 13 138 IPR000620 GO:0016020
Viun3g01813 376 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Viun3g01813 376 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Viun3g01813 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01813 Viun-Chr3 13361594 13363972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01813 11 370 Nodulin-like Gene Family AT1G25270 35.556 7.88e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01813 - - vum:124820047 628.246