Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01812 ATGAAATATGATAGGAAAGTAGCGCAAGAGCTGAAGCCTGCGTCGCTAATGGTGCTGTCGCAGGTTGCAACCGCTGCTGTGAACGTGCTTTATAAGTTGGCCATAAATGATGGAATGAACATTATGGTCCTCACTTCCTACCGTCACATTTTCGGAGCTGCTTTCTCTCTTTCTCTTGCTCTTCTTATAGAAAGAAAGAGGCCAAAGTTGACATGGAGGGTGCTTTTCATGGCATTTTTTTCCGGTCTATTTGGGGGCACTTTAGCGCAAAATCTTTATTTCATCGGTTTGGCTTGGGTATCAGCAACATTTGCTACTTCCCTTTATAATCTCGTTCCTCTGGTTACTTTTATCTTCTCCGTTTTGTTCGGGTTGGAAAAGTTAAGTTTGCGAACAACCTCAGGGAGGGTGAAGGTGTTGGGACCAATAATAGGAATTGTTGGGTCAATGGTGTTGACATTTTACAGAGGGACAGAAATTAAGATCTGGACCTTCCACACTACTCTCTTACATAAAAATCAAAAGGGTCACCTAGGATCATCGAACCTTGATTCTGGAAGAAGATGGGTGGGTGTTTTATGTGGTCTTGGAAGTGTTACAAAGATGAACAAAGAATATCCAAGCCATTTCTCAAGTAGTGCATTGATGAGCTTAATGGGGGCAATACAAGCCACAGTGTTTGCTCTATGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAGTATCAGGCTTCTAACTGCGGCTTTCTCTGGAATTGTGGTATCTGGAGTTGTTGTTATTGTCACTGCTTGGTGTGTAGGGGTTAAAGGTCCATTGTATGCATCTGTTTTCAACCCTCTCTCACTTGTCATTGTGGCTTTTTTTGCTCCTTTGCTGTTGGAAGAAAACCTATATCTAGGAAGTGTAATTGGAGCGGTGCTTATTGTGTGTGGGTTGTACATGGTGCTGTGGGGTAAAAGCAAAGAAATAAAAACATCATCGGAAAAAACCAAACATCTCGAAGCGAGTTCAGGTGTTCAAATTACCAACAATTGTTGA 1044 0.4243 MKYDRKVAQELKPASLMVLSQVATAAVNVLYKLAINDGMNIMVLTSYRHIFGAAFSLSLALLIERKRPKLTWRVLFMAFFSGLFGGTLAQNLYFIGLAWVSATFATSLYNLVPLVTFIFSVLFGLEKLSLRTTSGRVKVLGPIIGIVGSMVLTFYRGTEIKIWTFHTTLLHKNQKGHLGSSNLDSGRRWVGVLCGLGSVTKMNKEYPSHFSSSALMSLMGAIQATVFALCVEKDWSQWRLGWSIRLLTAAFSGIVVSGVVVIVTAWCVGVKGPLYASVFNPLSLVIVAFFAPLLLEENLYLGSVIGAVLIVCGLYMVLWGKSKEIKTSSEKTKHLEASSGVQITNNC 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01812 347 PANTHER WAT1-RELATED PROTEIN 13 328 IPR030184 GO:0016020|GO:0022857
Viun3g01812 347 Pfam EamA-like transporter family 201 318 IPR000620 GO:0016020
Viun3g01812 347 Pfam EamA-like transporter family 13 137 IPR000620 GO:0016020
Viun3g01812 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 146 - -
Viun3g01812 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01812 Viun-Chr3 13352755 13354492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01812 11 338 Nodulin-like Gene Family AT1G25270 41.003 1.26e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01812 - - var:108326689 585.489