Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01811 ATGAAATATGATAGGAAAGTAGCGCAAGAGCTGAAGCCTGCGTCGCTAATGGTGCTGTCGCAGGTTGCAACCGCTGCTGTGAACGTGCTTTATAAGTTGGCCATAAATGATGGAATGAACATTATGGTCCTCACTTCCTACCGTCACATTTTCGGAGCTGCTTTCTCTCTTTCTCTTGCTCTTCTTATAGAAAGAAAGAGGCCAAAGTTGACATGGAGGGTGCTTTTCATGGCATTTTTTTCCGGTCTATTTGGGGGCACTTTAGCGCAAAATCTTTATTTCATCGGTTTGGCTTGGGTATCAGCAACATTTGCTACTTCCCTTTATAATCTCGTTCCTCTGGTTACTTTTATCTTCTCCGTTTTGTTCGGGTTGGAAAAGTTAAGTTTGCGAACAACCTCAGGGAGGGTGAAGGTGTTGGGACCAATAATAGGAATTGTTGGGTCAATGGTGTTGACATTTTACAGAGGGACAGAAATTAAGATCTGGACCTTCCACACTACTCTCTTACATAAAAATCAAAAGGGTCACCTAGGATCATCGAACCTTGATTCTGGAAGAAGATGGGTGGGTGTTTTATGTGGTCTTGGAAGTGTTTGTATGATGCAGACAAAGATGAACAAAGAATATCCAAGCCATTTCTCAAGTAGTGCATTGATGAGCTTAATGGGGGCAATACAAGCCACAGTGTTTGCTCTATGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAGTATCAGGCTTCTAACTGCGGCTTTCTCTGGAATTGTGGTATCTGGAGTTGTTGTTATTGTCACTGCTTGGTGTGTAGGGGTTAAAGGTCCATTGTATGCATCTGTTTTCAACCCTCTCTCACTTGTCATTGTGGCTTTTTTTGCTCCTTTGCTGTTGGAAGAAAACCTATATCTAGGAAGTGTAATTGGAGCGGTGCTTATTGTGTGTGGGTTGTACATGGTGCTGTGGGGTAAAAGCAAAGAAATAAAAACATCATCGGAAAAAACCAAACATCTCGAAGCGAGTTCAGGTGTTCAAATTACCAACAATTGTTGA 1056 0.4242 MKYDRKVAQELKPASLMVLSQVATAAVNVLYKLAINDGMNIMVLTSYRHIFGAAFSLSLALLIERKRPKLTWRVLFMAFFSGLFGGTLAQNLYFIGLAWVSATFATSLYNLVPLVTFIFSVLFGLEKLSLRTTSGRVKVLGPIIGIVGSMVLTFYRGTEIKIWTFHTTLLHKNQKGHLGSSNLDSGRRWVGVLCGLGSVCMMQTKMNKEYPSHFSSSALMSLMGAIQATVFALCVEKDWSQWRLGWSIRLLTAAFSGIVVSGVVVIVTAWCVGVKGPLYASVFNPLSLVIVAFFAPLLLEENLYLGSVIGAVLIVCGLYMVLWGKSKEIKTSSEKTKHLEASSGVQITNNC 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01811 351 Pfam EamA-like transporter family 201 322 IPR000620 GO:0016020
Viun3g01811 351 Pfam EamA-like transporter family 13 137 IPR000620 GO:0016020
Viun3g01811 351 PANTHER WAT1-RELATED PROTEIN 13 332 IPR030184 GO:0016020|GO:0022857
Viun3g01811 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 146 - -
Viun3g01811 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01811 Viun-Chr3 13352755 13354492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01811 11 342 Nodulin-like Gene Family AT1G25270 41.298 1.57e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01811 - - var:108326689 589.341