Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01810 ATGAAATATGATAGGAAAGTAGCGCAAGAGCTGAAGCCTGCGTCGCTAATGGTGCTGTCGCAGGTTGCAACCGCTGCTGTGAACGTGCTTTATAAGTTGGCCATAAATGATGGAATGAACATTATGGTCCTCACTTCCTACCGTCACATTTTCGGAGCTGCTTTCTCTCTTTCTCTTGCTCTTCTTATAGAAAGAAAGAGGCCAAAGTTGACATGGAGGGTGCTTTTCATGGCATTTTTTTCCGGTCTATTTGGGGGCACTTTAGCGCAAAATCTTTATTTCATCGGTTTGGCTTGGGTATCAGCAACATTTGCTACTTCCCTTTATAATCTCGTTCCTCTGGTTACTTTTATCTTCTCCGTTTTGTTCGGGTTGGAAAAGTTAAGTTTGCGAACAACCTCAGGGAGGGTGAAGGTGTTGGGACCAATAATAGGAATTGTTGGGTCAATGGTGTTGACATTTTACAGAGGGACAGAAATTAAGATCTGGACCTTCCACACTACTCTCTTACATAAAAATCAAAAGGGTCACCTAGGATCATCGAACCTTGATTCTGGAAGAAGATGGGTGGGTGTTTTATGTGGTCTTGGAAGTGTTGTAAGTTTTTCATCTTGGCTCATCATTCAGACAAAGATGAACAAAGAATATCCAAGCCATTTCTCAAGTAGTGCATTGATGAGCTTAATGGGGGCAATACAAGCCACAGTGTTTGCTCTATGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAGTATCAGGCTTCTAACTGCGGCTTTCTCTGGAATTGTGGTATCTGGAGTTGTTGTTATTGTCACTGCTTGGTGTGTAGGGGTTAAAGGTCCATTGTATGCATCTGTTTTCAACCCTCTCTCACTTGTCATTGTGGCTTTTTTTGCTCCTTTGCTGTTGGAAGAAAACCTATATCTAGGAAGTGTAATTGGAGCGGTGCTTATTGTGTGTGGGTTGTACATGGTGCTGTGGGGTAAAAGCAAAGAAATAAAAACATCATCGGAAAAAACCAAACATCTCGAAGCGAGTTCAGGTGTTCAAATTACCAACAATTGTTGA 1074 0.4227 MKYDRKVAQELKPASLMVLSQVATAAVNVLYKLAINDGMNIMVLTSYRHIFGAAFSLSLALLIERKRPKLTWRVLFMAFFSGLFGGTLAQNLYFIGLAWVSATFATSLYNLVPLVTFIFSVLFGLEKLSLRTTSGRVKVLGPIIGIVGSMVLTFYRGTEIKIWTFHTTLLHKNQKGHLGSSNLDSGRRWVGVLCGLGSVVSFSSWLIIQTKMNKEYPSHFSSSALMSLMGAIQATVFALCVEKDWSQWRLGWSIRLLTAAFSGIVVSGVVVIVTAWCVGVKGPLYASVFNPLSLVIVAFFAPLLLEENLYLGSVIGAVLIVCGLYMVLWGKSKEIKTSSEKTKHLEASSGVQITNNC 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01810 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 333 - -
Viun3g01810 357 PANTHER WAT1-RELATED PROTEIN 13 338 IPR030184 GO:0016020|GO:0022857
Viun3g01810 357 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Viun3g01810 357 Pfam EamA-like transporter family 13 137 IPR000620 GO:0016020
Viun3g01810 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01810 Viun-Chr3 13352755 13354492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01810 11 348 Nodulin-like Gene Family AT1G25270 42.773 8.75e-94 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01810 - - var:108326689 605.134