Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01805 ATGGCTTCTGCAACACCCAATGGTTTGGTGTCACAAAACCACGTAGGAGCAGTGCATCCAAGTCCAGCGAACAAAACCGATAAGAAGCAAACCCAGAAAGTTACCGAAGATCATGCCAACATAAACTACATGGAAAGAGCACAGTGGCTCCGTCCAGCAGTTTTAGGAGCCAACGATGGGTTGGTTTCGGTTGCTTCATTGATGATGGGTGTAGGAGCCGTTAAGAAAGACGCAAAGGCTATGCTACTTGCTGGTTTTGCAGGGTTGGTTTCAGGGGCCTGTGGCATGGCGATAGGAGAGTACGTTGCAGTGTACACTCAGTACGATGTTGAGATGTCTCAAATGAAGAGAGAGAGTTTAGGAGGGGAAAAGGACTTGGAGATGGCAATGGAGAAAAGAACGTTACCTAATCCACTGCAAGCTACTTTGGCATCTGCAGTATCCTTTTCTGTTGGTGCATTGATTCCTCTTCTTTCAGCTGCTTTCATACAAAGTTACAAGACAAGGCTTATTGTGGTCGTGACAACGGCTAGTTTGGCTTTGGTTGTGTTCGGAAGGGTGGTGGCTGAACTGGGAAAAACTCCTAAGTTAAAATCTTATTTAAGGTTCCTTCTTGGAGGATGGATAGCCATGGCCATCACTTTTGGGTTAACCAAATTACTGGATGCTAGTGCTTTAGAATAA 684 0.4547 MASATPNGLVSQNHVGAVHPSPANKTDKKQTQKVTEDHANINYMERAQWLRPAVLGANDGLVSVASLMMGVGAVKKDAKAMLLAGFAGLVSGACGMAIGEYVAVYTQYDVEMSQMKRESLGGEKDLEMAMEKRTLPNPLQATLASAVSFSVGALIPLLSAAFIQSYKTRLIVVVTTASLALVVFGRVVAELGKTPKLKSYLRFLLGGWIAMAITFGLTKLLDASALE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01805 227 CDD Nodulin-21 48 196 - -
Viun3g01805 227 MobiDBLite consensus disorder prediction 1 34 - -
Viun3g01805 227 MobiDBLite consensus disorder prediction 1 28 - -
Viun3g01805 227 Pfam VIT family 50 131 IPR008217 GO:0005384|GO:0030026
Viun3g01805 227 Pfam VIT family 131 218 IPR008217 GO:0005384|GO:0030026
Viun3g01805 227 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 25 222 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01805 Viun-Chr3 13307822 13308505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01805 27 226 Nodulin-like Gene Family AT3G43660 58.500 2.15e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01805 K22736 - gmx:100791523 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01805 3 13307822 13308505 Viun3g01805 3 13307822 13308505 ECH