Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01802 ATGGATTCTCTTGGCACCAGTGGCAATGAAATGCCAATTAACCATGTTGAGATTCTCAAACACTCCAATGATATAGAAGCAAATGACATGGAAGAAAACAATATTAAGTACTATGAAAGGGAACAATGTCTTGGGGCAGCAGTGTTTGGAGTCAAAACTGGGTTGTTCGTAACCACCTTTTTGATGACTGCCATTGAAGCTTTCAATGAAAACATCATAGCCATGCTTCTTGCTGGTTTCTTAGGACTAGTTGCTGGGGCTTGCAGCATGCCAATTGAAGAGTTTGTATCTGTTGACACAGAGGTAGCTCAAATGAAAGTCCACCATAACGAACACAACGAAGTGGAGGAAGATGATAACCTTCTAAACCCTTTTCAAGCTTCCTTAGCATCAGGAATTGGATTTTCTATTGGTGGAATGGTGTCAGTGCTAACAGCTGTTTTCATAAGGGACTATAAACTCAGGCTGCTAGTTATTTCTGTGGCTATGTTGGCATTGTTGGTATTTGGAGGGATGATAGCAGTACTTAGAAAAAGTAAACTAGTGAGAAGGAGTGGTGATAGTGGTGATAGTGGTGATTGGAGGTTAGATAACTATGGCTATTATTTTTGGATTTAA 618 0.3997 MDSLGTSGNEMPINHVEILKHSNDIEANDMEENNIKYYEREQCLGAAVFGVKTGLFVTTFLMTAIEAFNENIIAMLLAGFLGLVAGACSMPIEEFVSVDTEVAQMKVHHNEHNEVEEDDNLLNPFQASLASGIGFSIGGMVSVLTAVFIRDYKLRLLVISVAMLALLVFGGMIAVLRKSKLVRRSGDSGDSGDWRLDNYGYYFWI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01802 205 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 21 179 IPR008217 GO:0005384|GO:0030026
Viun3g01802 205 Pfam VIT family 45 118 IPR008217 GO:0005384|GO:0030026
Viun3g01802 205 Pfam VIT family 114 182 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01802 Viun-Chr3 13293125 13293961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01802 29 183 Nodulin-like Gene Family AT3G43660 45.399 4.06e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01802 K22736 - gmx:100527486 233.032