Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun3g01793 | ATGGCAGATAACAATGTCAACCTCCCACCTGGCTTTCACTTTTATCCCACAGATGAAGAGCTTGTCGTCCATTTCCTTCAAAGAAAGGCAAATCTTCTACCTTGCCATCCAGATGTCATCCCTGATCTTGAACTCTACCCATATGATCCTTGGGAACTTCATGGTAGAGCTTTGGCAGAGGGAAAGCAATGGTACTACTACAGCAGGAGGACACAAAATAGGGTCACTGGGAATGGTTATTGGATGCCAATGGGAATGGAAGAGCCAGTGATTACAAGCTCAAGCAACAAGAGAGTTGGCATGAAGAAATATTATGTTTTCCATGTGGGAGAAGCCCCTGATGCTAACACCACCAATTGGATAATGCAAGAGTATCGTCTATTAGATTCTGCTTCCTCTAGCAGATCATCCAGAAGAAGACCACAACCAAAACCGGATCACAGTAAATGGGTGATATGTCGAGTTTATGAGCGGGATAACGATGATGATGATGGTGATGGAACAGAGCTCTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGAGGAAATAAGTTTGCCAAATTAA | 573 | 0.4293 | MADNNVNLPPGFHFYPTDEELVVHFLQRKANLLPCHPDVIPDLELYPYDPWELHGRALAEGKQWYYYSRRTQNRVTGNGYWMPMGMEEPVITSSSNKRVGMKKYYVFHVGEAPDANTTNWIMQEYRLLDSASSSRSSRRRPQPKPDHSKWVICRVYERDNDDDDGDGTELSCLDEVFLSLDDLEEISLPN | 190 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun3g01793 | 190 | SUPERFAMILY | NAC domain | 4 | 157 | IPR036093 | GO:0003677|GO:0006355 | |
Viun3g01793 | 190 | ProSiteProfiles | NAC domain profile. | 8 | 158 | IPR003441 | GO:0003677|GO:0006355 | |
Viun3g01793 | 190 | FunFam | NAC domain-containing protein 104 | 17 | 161 | - | - | |
Viun3g01793 | 190 | Gene3D | NAC domain | 17 | 163 | IPR036093 | GO:0003677|GO:0006355 | |
Viun3g01793 | 190 | Pfam | No apical meristem (NAM) protein | 9 | 127 | IPR003441 | GO:0003677|GO:0006355 | |
Viun3g01793 | 190 | PANTHER | NAC TRANSCRIPTION FACTOR 56 | 8 | 162 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun3g01793 | Viun-Chr3 | 13165272 | 13166898 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun3g01793 | 6 | 158 | NAC Transcription Factor Family | AT1G52890 | 44.099 | 2.00e-40 | 137 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Viun3g01793 | NAM | 2.1e-28 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun3g01793 | 3 | 13165272 | 13166898 | Viun3g01793 | 3 | 13165272 | 13166898 | ECH |