Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01776 ATGGATGCTCTATCTTTAAGTTCAAGTTCAAGCCTAAGCATGTGCAAGCCCTTTCAGTCTCATGGTCTTCCACTCTCTAAACAGCAAAGAGTTTCCACTGTGAAGTTTGGTAGTGTTTCATGCAGAGCCACAACGCAAGAAAACTTGTACAAGGTACTGTCCGTGAGTCCTGGAAGAGCAACAACGGATGAGATTAAGAGGGCTTATAGATCCATGGCTCTTCGGTACCACCCTGATGTGTGCCATGATCCTTCCATGAAAGAGGAATCTACGAGGCTGTTTGTGCTGGTGAATGCCGCTTACAAGACTTTGTCCAATCCAAGGCTTCGAGAACAGTACGACAGTGAATTGGGTCTGAGAAGCAAAGTCATGAGTGCTGGTAGTGATGATGAGAGATGGGGAAGTGTTAGTGTTTGTAGTGATTTTGAGAGATGGGGAAGTACGTTTCAGGAGGAGGTGATTGAGGTGAAGACAAGGTCTCGTAGACGAATGGGACAAAAGGGAGGATCATCAGCTACCAGAATGAGAACACAAAACATGAAAGACAGACATTGA 555 0.4541 MDALSLSSSSSLSMCKPFQSHGLPLSKQQRVSTVKFGSVSCRATTQENLYKVLSVSPGRATTDEIKRAYRSMALRYHPDVCHDPSMKEESTRLFVLVNAAYKTLSNPRLREQYDSELGLRSKVMSAGSDDERWGSVSVCSDFERWGSTFQEEVIEVKTRSRRRMGQKGGSSATRMRTQNMKDRH 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01776 184 SMART dnaj_3 47 109 IPR001623 -
Viun3g01776 184 Pfam DnaJ domain 48 114 IPR001623 -
Viun3g01776 184 MobiDBLite consensus disorder prediction 158 184 - -
Viun3g01776 184 SUPERFAMILY Chaperone J-domain 45 113 IPR036869 -
Viun3g01776 184 PRINTS DnaJ domain signature 89 109 IPR001623 -
Viun3g01776 184 PRINTS DnaJ domain signature 69 84 IPR001623 -
Viun3g01776 184 PRINTS DnaJ domain signature 51 69 IPR001623 -
Viun3g01776 184 Gene3D DnaJ domain 36 132 IPR036869 -
Viun3g01776 184 CDD DnaJ 48 106 IPR001623 -
Viun3g01776 184 ProSiteProfiles dnaJ domain profile. 48 117 IPR001623 -
Viun3g01776 184 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 31 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01776 Viun-Chr3 13054945 13055686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01776 50 126 C2H2 Transcription Factor Family AT1G74250 37.975 3.28e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01776 - - gmx:100811478 286.189