Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01757 ATGGCGAACCCTAAAACCAAGAGTTCTCATTCGCTGGGTGGCGAGGGCGATCCCGAATCATACGAATCGCGATGGGTTTTCCAGGAGGACGACGATCCCTCCGAGATCGAGGACTTCGACGCCGCCGATTTGCGCCACCAGCCTATATTTGATTCTGAGGACGAGGACAATGGCGAACATAGACTCGTTCGCACCGGTCCTCGAATCGATTCATTTGATGTCGAAGCTCTCGAGGTTCCTGGCGCCCAGAGAAACGACTACGAGGATATTAGTGTGGGGAAGGGGATTCTGTTGGCTTTTCAAACTCTCGGTGTTGTTTTTGGTGATGTTGGAACGAGTCCTTTGTATACGTTCAGTGTTATGTTCAGGAAGGCTCCTATTAATGGAAATGAAGATATTCTTGGAGCTTTATCACTTGTTTTGTACACTTTAATCTTGATTCCTTTACTGAAGTATGTGCTTGTTGTTCTTTGGGCCAATGATGACGGCGAAGGTGGTACGTTTGCATTGTACTCGTTGATTTGTCGAAATGCTAAGGTGAGTCTTCTTCCCAATCAGTTGCGATCGGATGCCCGAATATCGGGCTTTAGACTGAAGGTGCCATCTCCTGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGACTAGAGACTTCGCTGACTCTTAAGAGGATTCTACTATTATTAGTTCTTGCTGGTATTTCCATGGTGATAGCTAATGGGGTGGTTACACCGGCAATGTCAGTACTATCATCTGTTAATGGTTTGAAGGTGGGGGTAGATGCAATTAAACAAGATGAAGTGGTGATGATTTCTGTTGCATGCCTTATCGTTTTGTTCAGTGTACAGAAATATGGAACAAGTAAAGTGGGGCTTGTTGTAGGACCTGCTTTGTTTATATGGTTTTGTTCTCTGGCGGGCATTGGTATATACAACCTTGTTAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTATTCACATATATTATTTCTTTGCAAGGAATTCAACTAAAGCGTGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGCTCCGAGGCAATGTTTGCAGATCTTTGCTATTTCCCTGTACGGTCAGTTCAGCTTACATTTGTATTTCTTGTTTTACCGTGCCTACTGTTGGGTTATTTGGGTCAAGCTGCTTACCTTATGGAAAACCATGCTGATGCTGGCGATGCCTTCTATTCTTCTGTTCCAAGTGGGGCATTCTGGCCAACTTTCCTCATTGCTAACATTGCTGCATTAATTGCAAGTCGGGCTATGACAACAGCCACATTTTCTTGTATAAAACAGTCTGCTGCACTTGGTTGTTTCCCTCGTCTTAAGATAGTTCATACCTCTCGGAAATTTATGGGACAGATCTATATCCCTGTCATAAACTGGTTTCTCTTGGCTGTTTCTTTGGTGTTTGTGTGTACTATATCCAGCCTTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGAGTGATGATGATGACCACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATTCACATCATTGTAGTGCTGTGTTTTGGAGTAGTCTTCCTGGGATTGGAGTTGACTTTCTTTTCATCAGTTTTGTGGAGTGTAACTGATGGAAGTTGGATCATATTGGTCTTTGCTGGATTAATGTTTTTTATAATGTTTGTATGGAATTATGGGAGCAAGCTCAAATATGAAACTGAAGTAAAGCAAAAACTGTCAATGGATTTGATGCGAGAATTAGGCTGTAATCTTGGGACAATACGAGCTCCTGGAATTGGTTTGCTCTATAATGAGTTGGTGAAAGGAATTCCAGGCATTTTTGGCCATTTTCTAACCACGCTTCCAGCTATACACTCTATGATTATATTAGTGAGTATTAAGTATGTTCCAGTTCCTATGGTGGCTCAAAGTGAAAGGTTCCTTTTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGATGCATTGCCAGGTATGGTTACAAAGATGTTCGAAAAGAAAATCACCAGACTTTTGAGCAACTGTTGATGGAAAGCCTAGAGAAGTTTATACGTCGTGAAGCTCAGGAGAGGTCACTCGAGAGTGATGGGGATGATGATTCTGATTCTGAGGATGAGTACTCTGGTGCTAGGGTTCTCATTGCTCCCAATGGGAGTGTTTATTCACTTGGCGTACCTCTTCTGGCTGATTTTATTGATACAAACATACCCATACCCAAATTTGAAGCAAGCACATCTGAGGATGCACCTGAGTCTCCTAAGCCCCCAGTGCTTGATGCTGAGCAGAGTCTTGAGAGAGAGTTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTGGTTTACCTTCTTGGTCATGGGGATATAAGGGCTAGGAAAGACTCATGGTTTATCAAGAAGCTAATTATAAATTATTTTTATTCTTTTCTGAGAAAGAACTGCCGAAGGGGGATCACAAATTTAAGTGTACCCCATTCACATTTGATGCAGGTTGGCATGACTTACATGGTTTAA 2538 0.4232 MANPKTKSSHSLGGEGDPESYESRWVFQEDDDPSEIEDFDAADLRHQPIFDSEDEDNGEHRLVRTGPRIDSFDVEALEVPGAQRNDYEDISVGKGILLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLRSDARISGFRLKVPSPELERSLKIKERLETSLTLKRILLLLVLAGISMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISVACLIVLFSVQKYGTSKVGLVVGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFARNSTKAWYSLGGCLLCATGSEAMFADLCYFPVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGDAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSAALGCFPRLKIVHTSRKFMGQIYIPVINWFLLAVSLVFVCTISSLDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIVVLCFGVVFLGLELTFFSSVLWSVTDGSWIILVFAGLMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIILVSIKYVPVPMVAQSERFLFRRVCQRSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDSDSEDEYSGARVLIAPNGSVYSLGVPLLADFIDTNIPIPKFEASTSEDAPESPKPPVLDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYSFLRKNCRRGITNLSVPHSHLMQVGMTYMV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01757 845 MobiDBLite consensus disorder prediction 39 60 - -
Viun3g01757 845 MobiDBLite consensus disorder prediction 1 60 - -
Viun3g01757 845 NCBIfam potassium uptake protein 98 845 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun3g01757 845 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 94 843 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun3g01757 845 Pfam K+ potassium transporter 99 672 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01757 Viun-Chr3 12842760 12851136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01757 2 845 Inorganic Solute Cotransporters AT5G09400 77.491 0.0 1298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01757 - - gmx:100803841 1514.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01757 3 12842760 12851136 Viun3g01757 3 12842760 12851136 ECH
Viun3g01757 3 12842760 12851136 Viun6g03071 6 33224276 33230089 PCT