Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01745 ATGGACAGTCTTTGTTGCTTCAGCTCTGTCAGCCAGGTGGTTGGAGGACGATCTTCTTCTAACTCTGGCAAGGGCAAGAGCAGTCAGTCCTCAGTCAAATATGGCTATAGCCTAGTCAAAGGGAAAGCAAACCATCCCATGGAGGACTACCATGTGGCAAAATTTGTCCAGTTCAATGGGCGAGAGCTTGGCCTTTTTGCTATATATGACGGACACCTGGGAGACAGTGTACCGGCCTATTTACAGAAGCATCTGTTTCCTAATATCTTGAAGGAAGAGGACTTCTGGAATGATCCATTCATGTCCATTTCTAATGCCTATGTAACAACAGATCAGGAAATTCTTTCTCATAGTCCAGATTTGGGACGAGGAGGATCAACTGCAGTGACTGCAATTCTCATAAATAATCAAAAACTATGGGTAGCCAATGTAGGGGATTCACGAGCTGTTGTGTCAAGGGGAGGGGAGGCTGCACAGATGACAACTGATCATGAGCCCAATACTGAGAGGGGCAGCATTGAGACAAGAGGTGGCTTTGTCTCAAACATGCCAGGTGATGTTGCAAGAGTGAATGGGCAGCTAGCAGTTTCTCGAGCCTTCGGAGACAAAAACCTCAAAACACACTTGCGATCTGATCCTGACATTCAGTACGCTGATATCACCCCAGATGTTGAACTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGGAAATCAAGAAGCTGTTGATATTGCAAGAAGAATAAAGGATCCACAAAAAGCAGCGAAACAACTAGCCACTGAGGCATTGAACAGAGACAGTAAGGATGATATTTCCTGCATTGTAGTTCGTTTCAAGGGTTGA 849 0.4499 MDSLCCFSSVSQVVGGRSSSNSGKGKSSQSSVKYGYSLVKGKANHPMEDYHVAKFVQFNGRELGLFAIYDGHLGDSVPAYLQKHLFPNILKEEDFWNDPFMSISNAYVTTDQEILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVVSRGGEAAQMTTDHEPNTERGSIETRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADITPDVELLILASDGLWKVMGNQEAVDIARRIKDPQKAAKQLATEALNRDSKDDISCIVVRFKG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01745 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Viun3g01745 282 CDD PP2Cc 32 280 IPR001932 -
Viun3g01745 282 Gene3D - 16 282 IPR036457 -
Viun3g01745 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Viun3g01745 282 MobiDBLite consensus disorder prediction 153 176 - -
Viun3g01745 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Viun3g01745 282 PANTHER PROTEIN PHOSPHATASE 24 280 IPR015655 GO:0004722|GO:0006470
Viun3g01745 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Viun3g01745 282 FunFam Probable protein phosphatase 2C 39 24 281 - -
Viun3g01745 282 SMART PP2C_4 19 278 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01745 Viun-Chr3 12668889 12677527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01745 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.732 4.30e-146 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01745 K17506 - gmx:100776795 503.827