Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01734 ATGTGCTTGACATGGAAAAATGTATGGGTCACTGCTTCTGTGGGAAAGAATGGAAGCAAATCAATTCTGCAGGGTTTGACTGGTTATGCCAAACCAGGGCAACTTTTGGCCATAATGGGTCCTTCTGGTTGTGGAAAGTCCACACTCCTTGATGCTTTAGCAGGGAGATTAGGTTCCGACACAAGGCAAACTGGGGAGATTCTTATCAATGGGAAGAAACAAGCACTGGCATATGGAACATCAGCATATGTGACACAAGATGATACCTTGTTGACAACCTTAACGGTTGGAGAAGCTGTTCACTATTCAGCTCAACTCCAGTTACCTGACACCATGTCAAAACAAGAGAAGAAAGATAGAGCAGATTTTACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACAAGAATTGGAGGATTGTTTGTTAAAGGAATAAGCGGGGGTCAGAAAAGGAGAGTGAGTATTTGCATTGAGATTCTTACACGACCAGGGCTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATCGCTACACTTGATAAAAGAGATGATATTCAAAGAACTATTATTGCCTCAATCCACCAACCTAGTACTGAAGTTTTTCAACTTTTCGACAACCTTTGTCTTCTATCTTCAGGTAGAACTGTCTACTTTGGACCTGCTTCTGCTGCAAGTGAGTTTTTCGCTTCAAATGGTTTTCCTTGTCCTTCTCTCATGAATCCATCAGATCATATGCTGAAAACCATAAACAAGGATTTCGAACAGGACACTGAGTTAGGAGGGAATGAAGCAATACCCACCAAAGAAGTGATTGAGATCCTTGTAAATTCGTACAAGTCATCTGAAATGAACCAAGAAGTTGAGAAAGAAGTAGCAGCACTAGCTGAAAAGGACACCAGTTCAACAAACAAGAAGAGAAAGCATGCTGGCTTTATTAATCAGTGCTTTTCTCTTACCAAAAGATCGTCCATTAACATGTATCGAGATCTCGGCTATTACTGGTTACGCCTTGCCATATATGTTGGATTGGCTATAAGTTTAGCCACTATTTTCTATGATCTGGGTACAAGTCATCGCTCAATTCAGGATAGAGGTTCATTTCTTATGTTTGTATCTTCATTCATCACTTTCATGACCATTGGCGGATTTCCTTCCTTTGTGGAGGATATGAAGGTGTTTGAACGTGAGAGACTAAATGGACATTACAGTGTGACTGCATATGTAATTGGGAACACCTTTTCATCAATCCCATTCTTGTTGTTGGTTTCCCTGATTCCTGGATCCATAGCCTATTACCTTCCTGGTCTTCAGAAAGGGTTTGAACACTTTGTATACTTCATATGTGCTCTCTTTTCTTGTCTGATGTTGGTAGAGAGCCTTATGATGATAGTTGCAAGCATTGTCCCCAACTTTCTCATGGGCATCATAACTGGAGCTGGAATTCAAGGAATGATGATTTTAAGTGGTGGGTTCTTCAGATTACCAAGCGATCTTCCAAAGCCATTTTGGAAATACCCAATGTTCTATTTTGCCTTCCATAGATATGCCTACCAAGGACTGTTCAAAAACGAGTTTGAAGGACTGAGATTCGCTTCAGATAATGGCGAAGGTGGCTCCTACATCACTGGCGAAGACATTTTAACAAACACATGGCAAGTAAACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGCTGGGGATGATTTTTCTGTATCGGGTCCTCTTCTTGGTTAACATCAAAACTACTGAGAAGCTGAAACCGATCATTGTATCATTCTTGTCGTCAAGAACTTCTACCAAGCGAACAACGTCGATCATGCAGAATCCCAATGCCACTCCTCTTCAAGAAGTTCATGTTATCTAA 1905 0.4079 MCLTWKNVWVTASVGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSDTRQTGEILINGKKQALAYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKQEKKDRADFTIREMGLQDAINTRIGGLFVKGISGGQKRRVSICIEILTRPGLLFLDEPTSGLDSAASYYVMKRIATLDKRDDIQRTIIASIHQPSTEVFQLFDNLCLLSSGRTVYFGPASAASEFFASNGFPCPSLMNPSDHMLKTINKDFEQDTELGGNEAIPTKEVIEILVNSYKSSEMNQEVEKEVAALAEKDTSSTNKKRKHAGFINQCFSLTKRSSINMYRDLGYYWLRLAIYVGLAISLATIFYDLGTSHRSIQDRGSFLMFVSSFITFMTIGGFPSFVEDMKVFERERLNGHYSVTAYVIGNTFSSIPFLLLVSLIPGSIAYYLPGLQKGFEHFVYFICALFSCLMLVESLMMIVASIVPNFLMGIITGAGIQGMMILSGGFFRLPSDLPKPFWKYPMFYFAFHRYAYQGLFKNEFEGLRFASDNGEGGSYITGEDILTNTWQVNMSYSKWVDLAILLGMIFLYRVLFLVNIKTTEKLKPIIVSFLSSRTSTKRTTSIMQNPNATPLQEVHVI 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01734 634 Pfam ABC-2 type transporter 326 537 IPR013525 GO:0016020|GO:0140359
Viun3g01734 634 Pfam ABC transporter 24 174 IPR003439 GO:0005524
Viun3g01734 634 ProSitePatterns ABC transporters family signature. 146 160 IPR017871 GO:0005524|GO:0016887
Viun3g01734 634 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 249 IPR003439 GO:0005524
Viun3g01734 634 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 609 - -
Viun3g01734 634 FunFam ABC transporter G family member 11 1 289 - -
Viun3g01734 634 Gene3D - 1 245 IPR027417 -
Viun3g01734 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 238 IPR027417 -
Viun3g01734 634 SMART AAA_5 32 226 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01734 Viun-Chr3 12528227 12535280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01734 22 210 Calmodulin-binding Proteins AT2G36910 29.744 4.71e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01734 K05681 - gmx:100813462 1092.8