Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01729 ATGGCTTCTCTTCTTCCACATCATTCACCTGCTCCTACTGATTATGAAACTAAACCTAATTCATCAAGAGTTGAAGCCACTGCACTGGAGATAGAAGAATGCAGTGGTCCGAAAGCAAAAGGGAGCAGAAGAGGAGAAAGTTCTGGTTGGAGAGAAGAGGAAGGTATGTGCTTGACATGGAAAAATGTATGGGTCACTGCTTCTGTGGGAAAGAATGGAAGCAAATCAATTCTGCAGGGTTTGACTGGTTATGCCAAACCAGGGCAACTTTTGGCCATAATGGGTCCTTCTGGTTGTGGAAAGTCCACACTCCTTGATGCTTTAGCAGGGAGATTAGGTTCCGACACAAGGCAAACTGGGGAGATTCTTATCAATGGGAAGAAACAAGCACTGGCATATGGAACATCAGCATATGTGACACAAGATGATACCTTGTTGACAACCTTAACGGTTGGAGAAGCTGTTCACTATTCAGCTCAACTCCAGTTACCTGACACCATGTCAAAACAAGAGAAGAAAGATAGAGCAGATTTTACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACAAGAATTGGAGGATTGTTTGTTAAAGGAATAAGCGGGGGTCAGAAAAGGAGAGTGAGTATTTGCATTGAGATTCTTACACGACCAGGGCTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATCGCTACACTTGATAAAAGAGATGATATTCAAAGAACTATTATTGCCTCAATCCACCAACCTAGTACTGAAGTTTTTCAACTTTTCGACAACCTTTGTCTTCTATCTTCAGGTAGAACTGTCTACTTTGGACCTGCTTCTGCTGCAAGTGAGTTTTTCGCTTCAAATGGTTTTCCTTGTCCTTCTCTCATGAATCCATCAGATCATATGCTGAAAACCATAAACAAGGATTTCGAACAGGACACTGAGTTAGGAGGGAATGAAGCAATACCCACCAAAGAAGTGATTGAGATCCTTGTAAATTCGTACAAGTCATCTGAAATGAACCAAGAAGTTGAGAAAGAAGTAGCAGCACTAGCTGAAAAGGACACCAGTTCAACAAACAAGAAGAGAAAGCATGCTGGCTTTATTAATCAGTGCTTTTCTCTTACCAAAAGATCGTCCATTAACATGTATCGAGATCTCGGCTATTACTGGTTACGCCTTGCCATATATGTTGGATTGGCTATAAGTTTAGCCACTATTTTCTATGATCTGGGTACAAGTCATCGCTCAATTCAGGATAGAGGTTCATTTCTTATGTTTGTATCTTCATTCATCACTTTCATGACCATTGGCGGATTTCCTTCCTTTGTGGAGGATATGAAGGTGTTTGAACGTGAGAGACTAAATGGACATTACAGTGTGACTGCATATGTAATTGGGAACACCTTTTCATCAATCCCATTCTTGTTGTTGGTTTCCCTGATTCCTGGATCCATAGCCTATTACCTTCCTGGTCTTCAGAAAGGGTTTGAACACTTTGTATACTTCATATGTGCTCTCTTTTCTTGTCTGATGTTGGTAGAGAGCCTTATGATGATAGTTGCAAGCATTGTCCCCAACTTTCTCATGGGCATCATAACTGGAGCTGGAATTCAAGGAATGATGATTTTAAGTGGTGGGTTCTTCAGATTACCAAGCGATCTTCCAAAGCCATTTTGGAAATACCCAATGTTCTATTTTGCCTTCCATAGATATGCCTACCAAGGACTGTTCAAAAACGAGTTTGAAGGACTGAGATTCGCTTCAGATAATGGCGAAGGTGGCTCCTACATCACTGGCGAAGACATTTTAACAAACACATGGCAAGTAAACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGCTGGGGATGATTTTTCTGTATCGGGTCCTCTTCTTGGTTAACATCAAAACTACTGAGAAGCTGAAACCGATCATTGTATCATTCTTGTCGTCAAGAACTTCTACCAAGCGAACAACGTCGATCATGCAGAATCCCAATGCCACTCCTCTTCAAGAAGTTCATGTTATCTAA 2070 0.4106 MASLLPHHSPAPTDYETKPNSSRVEATALEIEECSGPKAKGSRRGESSGWREEEGMCLTWKNVWVTASVGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSDTRQTGEILINGKKQALAYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKQEKKDRADFTIREMGLQDAINTRIGGLFVKGISGGQKRRVSICIEILTRPGLLFLDEPTSGLDSAASYYVMKRIATLDKRDDIQRTIIASIHQPSTEVFQLFDNLCLLSSGRTVYFGPASAASEFFASNGFPCPSLMNPSDHMLKTINKDFEQDTELGGNEAIPTKEVIEILVNSYKSSEMNQEVEKEVAALAEKDTSSTNKKRKHAGFINQCFSLTKRSSINMYRDLGYYWLRLAIYVGLAISLATIFYDLGTSHRSIQDRGSFLMFVSSFITFMTIGGFPSFVEDMKVFERERLNGHYSVTAYVIGNTFSSIPFLLLVSLIPGSIAYYLPGLQKGFEHFVYFICALFSCLMLVESLMMIVASIVPNFLMGIITGAGIQGMMILSGGFFRLPSDLPKPFWKYPMFYFAFHRYAYQGLFKNEFEGLRFASDNGEGGSYITGEDILTNTWQVNMSYSKWVDLAILLGMIFLYRVLFLVNIKTTEKLKPIIVSFLSSRTSTKRTTSIMQNPNATPLQEVHVI 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01729 689 Pfam ABC transporter 79 229 IPR003439 GO:0005524
Viun3g01729 689 FunFam ABC transporter G family member 11 56 344 - -
Viun3g01729 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 46 664 - -
Viun3g01729 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 293 IPR027417 -
Viun3g01729 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 304 IPR003439 GO:0005524
Viun3g01729 689 Pfam ABC-2 type transporter 381 592 IPR013525 GO:0016020|GO:0140359
Viun3g01729 689 MobiDBLite consensus disorder prediction 1 23 - -
Viun3g01729 689 Gene3D - 48 300 IPR027417 -
Viun3g01729 689 SMART AAA_5 87 281 IPR003593 GO:0016887
Viun3g01729 689 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01729 Viun-Chr3 12527969 12535280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01729 77 265 Calmodulin-binding Proteins AT2G36910 29.744 6.91e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01729 K05681 - gmx:100813462 1137.87