Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01727 ATGGAGGAAGAGAACGACATAACGTTGACATGGGAGAATTTGCAGGCTAGAGTTACAAGTGGAAAGAATAGAAAAATAATACTCAATGGTCTTACTGGTTATGCTCAACCAGGGAAGCTTTTGGCTATAATCGGTCCTTCTGGTTGTGGCAAATCAACACTTCTTGATGCGTTAGCAGGAAGATTGGGATCGAACATAAAGCAAACGGGGAAGATTCTAATCAATGGCCTCAAGCAAGAACTGGCGTACGGAACATCTGGGTATGTGACACAAGATGATGCGATGCTGTCATGTTTAACTGCTGGGGAAACGTTGTACTACTCAGCAGAACTCCAATTTCCAAACAGCATGTCTAAAGCTGAGAAGAAGGAAAGAGCAGATGCTACACTGAGAGAAATGGGTCTGCAAGATGCCATCAACACAAGGGTTGGAGGGTGGAGTTGTAAAGGTCTCAGTGGGGGACAGAAGCGCAGACTCAGCATTTGCGTTGAGATTCTAACACATCCCACACTCCTCTTCCTCGATGAACCAACCAGTGGCCTTGACAGTGCTGCTTCCTATTATGTTATGACTGGCATTGCAAGTCTCAATCTGAAGGATGGGATTCAAAGGACTATCGTTACTTCCATCCACCAGCCCAGCAGTGAGGTTTTCCAACTTTTTCATCATCTTTGTCTTCTCTCTTCAGGAGAGACTGTGTATTTTGGACCAGCCTCTGATGCAAATCAGTTTTTTTCTTCAAATGGTTTTCCCTGCCCACCTCTCTACAATCCTTCAGATCACTACCTAAGGATCATAAATAGAGATTTCAATCAGGATGCTGACGAAGGAATTACCACTGAAGAAGCAACTAATATCCTTGTCAGTTCTTATAAGTCGTCTGAATATAGAAATCACGTTCAGAATGAAATAGCAAAAATAAGTGAAAACGATTCTGGTGCAGTTGGAAGGAAGAAGATTCACGCTGCATTCCTTACTCAGTGTCTGGTTCTTCTGAGAAGATCTTCGAAGCAAATCTATCGTGATATAAGCAATTACTGGTTGCGTCTAACTGTCTTTATTGTAGTATCTGTAAGCTTGGGCTCTATCTTTTATCACGTTGGTGCAAGTATGAGATCAATTCAGGAAAGAGGATCGCTGCTTTGTTTTTACGTTTCAGTTCTGTGTTTCATGACACTTGTCGGTGGATTCTCGCCGTTAATCGAGGAAATGAAGGTGTTCAAGAGAGAGAGATTGAACGGACATTATGGTATAACAGCTTTTCTGGTAGGGAGCACATTTTCTGCTGTTCCTTACACACTATTGGTATCTTTCATTCCCGGAGCTATTGTTAATTATCTTTCTGGACTGCACAAAGGACTAGAGAACTTTGTATACTTTGCTTCTGTTCTATTTGCTATTGTGATGTGGGTTGAGAGCTTGATGATGGTTGTTGGGAGCATTTTTCCAAATTTTGTGATGGGTGTGATCACTGCTGGTGGAGTTGAAGGACTGATGATTTTGACAAGTGGATTCTACAGGCTGCCAAATGATCTTCCGAAACCACTGTGGAAATACCCTTTCTACCATGTTTCCTTCCTCAACTATGCTTTCCAAGGATTGTTAAAGAATGAATTTGAAGGATTAATGTTTTGTTCAGATGAGGATGGTGGTGCCAGAAGTCTTAATGGTAGAGATATTCTGGCTGAGACATGGCATGTGCAAATGGGTCATTCAAAGTGGGTTGATCTTGCTATCATGTTTGGTATGATTGTTCTGTATAGAGTTCTGTTCTTGGTGATCACTAAATGCAAGGAGAAATTGAAACATGTTCACATTGGCACTAGTGGTCCTCAAGCAAAAGTTTTCTCCAGAACCAACATTAATGATCTGTAG 1875 0.4165 MEEENDITLTWENLQARVTSGKNRKIILNGLTGYAQPGKLLAIIGPSGCGKSTLLDALAGRLGSNIKQTGKILINGLKQELAYGTSGYVTQDDAMLSCLTAGETLYYSAELQFPNSMSKAEKKERADATLREMGLQDAINTRVGGWSCKGLSGGQKRRLSICVEILTHPTLLFLDEPTSGLDSAASYYVMTGIASLNLKDGIQRTIVTSIHQPSSEVFQLFHHLCLLSSGETVYFGPASDANQFFSSNGFPCPPLYNPSDHYLRIINRDFNQDADEGITTEEATNILVSSYKSSEYRNHVQNEIAKISENDSGAVGRKKIHAAFLTQCLVLLRRSSKQIYRDISNYWLRLTVFIVVSVSLGSIFYHVGASMRSIQERGSLLCFYVSVLCFMTLVGGFSPLIEEMKVFKRERLNGHYGITAFLVGSTFSAVPYTLLVSFIPGAIVNYLSGLHKGLENFVYFASVLFAIVMWVESLMMVVGSIFPNFVMGVITAGGVEGLMILTSGFYRLPNDLPKPLWKYPFYHVSFLNYAFQGLLKNEFEGLMFCSDEDGGARSLNGRDILAETWHVQMGHSKWVDLAIMFGMIVLYRVLFLVITKCKEKLKHVHIGTSGPQAKVFSRTNINDL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01727 624 Gene3D - 1 248 IPR027417 -
Viun3g01727 624 FunFam ABC transporter G family member 11 7 290 - -
Viun3g01727 624 Pfam ABC transporter 29 179 IPR003439 GO:0005524
Viun3g01727 624 Pfam ABC-2 type transporter 211 306 IPR043926 GO:0140359
Viun3g01727 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 4 605 - -
Viun3g01727 624 Pfam ABC-2 type transporter 326 539 IPR013525 GO:0016020|GO:0140359
Viun3g01727 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 246 IPR027417 -
Viun3g01727 624 ProSitePatterns ABC transporters family signature. 151 165 IPR017871 GO:0005524|GO:0016887
Viun3g01727 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 9 254 IPR003439 GO:0005524
Viun3g01727 624 SMART AAA_5 37 226 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01727 Viun-Chr3 12486661 12489754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01727 27 193 Calmodulin-binding Proteins AT2G36910 30.233 3.56e-11 64.7