Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01726 ATGACGAGTTCGAGTTCCGTTCACTGTGATCTTCTTGTGCAAGAAGAAGATATTTTAGAGGAGAAGAACAGAAAAACTACTCTGCATATGCTCATAGCAGAAGAAGCTGAAGGTGATGACACCAAGGCAATAGAAATGAGTGTAAGAGTTGAGGGAGCGAAGGAGGACATAACAGTGACATGGGAGAATTTGTGGGTCACTGTTTCAAGTGGAAAGAAAAAGAAGCCAATTTTGCAGGGTCTTACAGGTTATGCTAGCCCAGGGAGGATTCTGGCCATAATGGGCCCTTCAGGATGTGGAAAATCTACACTTCTTGATGGTTTAGCAGGAAGATTGAGCTCACAAATGAAGCATACAGGGAAGATTCTAATCAATGGCCAGAAACAAACACTGGCCTATGGAACATCAGGCTATGTAACACAAGAAGATGCTATGCTGTCAACTTTAACAGCTGGGGAAACTTTATACTACTCTGCTGAGCTCCAGTTTCCAGATTCCATGTCCACAGCAGAGAAGAAGGAACAAGCAGATATCACACTCAGAGAAATGGGTCTGCAAGGTGCCATTAACACAAGGGTTGGAGGGTGGGGTTCTAAGGGTCTCAGTGGGGGACAAAAGAGGAGACTTAGCATCTGCATTGAGATTCTAACACGGCCAAGACTCCTTTTCCTTGATGAACCAACAAGTGGACTTGACAGTGCAGCTTCCTATTATGTTATGAGTAGAATTGCAACTCTAAATCTAAGAGATGGAATTCGAAGGACTATTGTTACTTCCATCCATCAGCCAAGCAGTGAAGTCTTTGAACTTTTTCATGATCTCTGTCTTCTGTCTTCTGGTGAAACTGTATATTTTGGTCCAGCCTCTGATGCAAATCAGTTTTTTTCTTCAAACGGTTTCCCATGCCCAACCCTCCACAATCCTTCTGATCACTACTTAAGGATCATAAATAAAGATTTCGAACAGGATGCTGAAGAAGGCTTTGGCAAGGGAGTAAGTACAGAAAAAGCAATTGATACCCTTGTAAAGTCTTATAGGTTGTCTCAAGTAAGAAAACAAGTTAAAAGGGAAGTGAAAAAAATAGTTGAAAGTGATTCTTGTGAAGCAAGGAAGAACAGGATTCATGCTGCATTTCCCACTCAATGCCTTGTTCTTACAAGAAGATCTTCATTGCAATTCTTTCGTGACATAAGCAATTACTGGCTACGTTTAATAGTCTTTATTGTAATAGCTATAAGCATTGGATCTATCTTCTACAACATAGGCACAGAAAATGGATCTGTTCAGGGGAGAGGTTCTCTGCTCATATTTTTTGTTTCAGTTCTGACTTTCATGACCCTTGTCGGTGGATTTTCTCCACTCCTGGAGGAAATGAAGGTATTTGGACGAGAGAGATTGAATGGGCACTATGGGGTGACAGCATTTCTGATAGGACACACATTCTCTGCTGTTCCTTACATGATACTGATCTCTGTTATTCCTGGAGGAATAGTGTACCACCTTTGTGGATTGCACAAAGGAATAGATCGTTTCTTCTACTTCACATCTTTGCTATTCGCCATAGTTATGTGGGTTGAGAGTCTCATGTTGGTGATTGGAAGCATCTCCCCAAACTATGTAATAGGCATGTTCCTTGCTGGTGGAGTTGAAGGACTCATGATTGTAACGGGTGGATTCTATAGACTGCCAAATGATCTTCCGAAGCCATTGTGGAAGTACCCTTTCTACTATGTTTCCTTCCTCAAGTATGCCCTCCAAGGATCCTTCAAGAATGACTTTGATGGCCTAACATTTTCAGTGAATCTTGAAGGAGGAGGCTCTGCAAGCATGAGTGGTAGAGAAGTTCTAGCAGAAACATGGCACGTGGAAATGGGACATTCTAAGTGGGTCGATCTTGCAATCATGTTTGCAATGATTCTTCTGTATCGAGTTCTGTTCTTGGTCATCACTAAGTTCAAGGAGAAGTTCAAGCCTTTTCTTGCATCCATTAGTCTTCGACCATGA 2004 0.4192 MTSSSSVHCDLLVQEEDILEEKNRKTTLHMLIAEEAEGDDTKAIEMSVRVEGAKEDITVTWENLWVTVSSGKKKKPILQGLTGYASPGRILAIMGPSGCGKSTLLDGLAGRLSSQMKHTGKILINGQKQTLAYGTSGYVTQEDAMLSTLTAGETLYYSAELQFPDSMSTAEKKEQADITLREMGLQGAINTRVGGWGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIATLNLRDGIRRTIVTSIHQPSSEVFELFHDLCLLSSGETVYFGPASDANQFFSSNGFPCPTLHNPSDHYLRIINKDFEQDAEEGFGKGVSTEKAIDTLVKSYRLSQVRKQVKREVKKIVESDSCEARKNRIHAAFPTQCLVLTRRSSLQFFRDISNYWLRLIVFIVIAISIGSIFYNIGTENGSVQGRGSLLIFFVSVLTFMTLVGGFSPLLEEMKVFGRERLNGHYGVTAFLIGHTFSAVPYMILISVIPGGIVYHLCGLHKGIDRFFYFTSLLFAIVMWVESLMLVIGSISPNYVIGMFLAGGVEGLMIVTGGFYRLPNDLPKPLWKYPFYYVSFLKYALQGSFKNDFDGLTFSVNLEGGGSASMSGREVLAETWHVEMGHSKWVDLAIMFAMILLYRVLFLVITKFKEKFKPFLASISLRP 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01726 667 CDD ABCG_EPDR 57 286 - -
Viun3g01726 667 FunFam ABC transporter G family member 11 57 344 - -
Viun3g01726 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 304 IPR003439 GO:0005524
Viun3g01726 667 SMART AAA_5 87 280 IPR003593 GO:0016887
Viun3g01726 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 296 IPR027417 -
Viun3g01726 667 Pfam ABC-2 type transporter 261 319 IPR043926 GO:0140359
Viun3g01726 667 Pfam ABC-2 type transporter 380 591 IPR013525 GO:0016020|GO:0140359
Viun3g01726 667 Pfam ABC transporter 79 229 IPR003439 GO:0005524
Viun3g01726 667 Gene3D - 57 387 IPR027417 -
Viun3g01726 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 51 662 - -
Viun3g01726 667 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01726 Viun-Chr3 12471355 12477511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01726 77 239 Calmodulin-binding Proteins AT2G36910 33.333 5.09e-10 61.2