Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01720 ATGGTTAAGGCTGACAGCTCCTTGCCTTGCTCACACCATGTGGCTTGGCAATCACCTTCTTTGAATTACTTAAGCATGCTGCCTAAGCCCGGCTCACTCGGTCTCCCAACATATCTGAACTCAAGCACTTCCATCTTACCTCATGGGCTTGCAGCTCCTTCTATTCGAAGTCTCAAGACTGAACTAACAAATGAAATGCAAGGATACCTTAAGTATCATCACAATGCAGACACAAGTCTGAAAGAAATGCATCTTGGAGGAGCTTTACAAAATGCAAATCCTTCTTTGCAGAAGAGGTTACTTATCTTTGACCGCTCTGATAATAAGACAAGGTTGTTTTATGGGCCTGTCCCTCCTCTTGTCCAGAGTCCAACTGTCACTGCTAAGAAATTTGCTCAAAGTTATGATGTAAATGGGGAGGAACAGACTAGAATTATGGGTCAAAAGCATCTTGCCAGTTATGGTATACTGGAAGAGTCTGTTGAGGATAATGCAGTTATTGAAGAAAGTGAAAAGCATGAAGATACGGAAGAAATAAATGCATTGCTTTATTCCGATGATGACAGCAGTGAATATGATGAGGATGATTGTGATGAGGTAACAAGTACAGATCGTTCTCCTTTGGCAACTAGAAGGACTTATACGATACAAGAACAATGTGAAGACTTGAAGGAGGAGGTTGCCAGCTCTTATTGGCCTAAGAAAAGGATGAAGTTAATTGATGGTGGCGACAATAGATCATCCCCACGTGTGGAAAAAACTACTTTGGTACAACCAAATGAAACCTGTGATAATATTAGTGATGCTGAATCAAAGAACTCTAGTGGCTGGACATATTCTGTTGATAAAACTAAAGTAGATGATTCAGGGGTGTGTGATATCAAATTAAAAAAGGATAAGATCCGAGAATCTTTGAGAGTTCTGGAGAATTTAATTCCTGGTGCAAAAGGAAAGGAGCCAATGTTAGTCATTGATGGAACTATTGAGTACTTGAAAGTTTTGATGTCCCAAACTGGTTCTCCTGGGGTAGAACATCACTAA 1041 0.4035 MVKADSSLPCSHHVAWQSPSLNYLSMLPKPGSLGLPTYLNSSTSILPHGLAAPSIRSLKTELTNEMQGYLKYHHNADTSLKEMHLGGALQNANPSLQKRLLIFDRSDNKTRLFYGPVPPLVQSPTVTAKKFAQSYDVNGEEQTRIMGQKHLASYGILEESVEDNAVIEESEKHEDTEEINALLYSDDDSSEYDEDDCDEVTSTDRSPLATRRTYTIQEQCEDLKEEVASSYWPKKRMKLIDGGDNRSSPRVEKTTLVQPNETCDNISDAESKNSSGWTYSVDKTKVDDSGVCDIKLKKDKIRESLRVLENLIPGAKGKEPMLVIDGTIEYLKVLMSQTGSPGVEHH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01720 346 MobiDBLite consensus disorder prediction 184 200 - -
Viun3g01720 346 PANTHER TRANSCRIPTION FACTOR BHLH145 10 344 IPR037546 -
Viun3g01720 346 MobiDBLite consensus disorder prediction 184 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01720 Viun-Chr3 12421797 12425780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01720 86 346 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 36.559 1.34e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01720 - - gmx:100817942 515.383