Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01678 ATGTTGCGACTTTCGATTCGACGAGCGAGAATGTTAAACTTTCTGGGGCCTCAGATCTCTGCATCGGGAAGGTCCCATTTCTCAACTGCTGTCGAACCATCTTCGAGTAAGAGCAATCCACCGAGGGTTCCAAATCTTATTGGGGGCAGTTTTGTTGACTCAAAATCATCATCTGTCATTGATGTTATAAACCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCTTTGTCTACGGATGAAGAGTTTAAGGCAGCTGTATCTGCGGCAAAGAAGGCATATCCATTATGGCGTAACACTCCAATTACAACACGCCAACGTGTTATGTTGAAGTTTCAGGAGCTTATACGCAGAGATATGGACAAACTTGCCCTGAATGTGACCACTGAACAAGGAAAGACGTTGAAGGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAAATGGGGGAATATGTTTCAAATGTATCACATGGAATTGATACTTACAGTATTAGGGAACCACTTGGTGTTTGCGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCTGTGGCTGTTACTTGTGGTAACACCTTTGTTCTAAAACCATCAGAGAAAGACCCAGGTGCTTCTGTAATGCTTGCAGAATTAGCATTGGAGGCTGGTTTGCCAGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATATTGTGAATGCTATTTGCGACAATGATGACATCAAAGCCATATCATTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAACATGGGAGCAAAAAATCATGCCATTGTCATGCCAGATGCAAATGTTGATGCTACTCTAAATGCTTTAGTTGCAGCTGGTTTTGGTGCTGCTGGTCAAAGATGTATGGCTCTCAGCACAGTTGTTTTCGTTGGGGACGCAAAATCATGGAAAGCTAAACTCGTAGAGCGTGCGAAAGCTCTCAAGGTAAATGCGGGAACTGAACCTGATACAGACCTTGGTCCAGTGATCAGCAAGCAGGCAAAGGAGAGAATACACAAACTAGTTAAATCTGGGGTTGAAAGTGGTGCCAAATTACTGCTGGACGGAAGAAATATTGTGGTTCCAGGATATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATATCACAACCAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTCCTTTTCATGGAGGCTGATAGCTTGGAAGAGGCCATAAGCATTATCAACAGTAACAAATACGGAAATGGTGCTTCTATATTCACCACTTCTGGTGTTGCTGCAAGGAAATTTCAGACTGAGATAGAGGCAGGCCAGGTCGGCATCAATGTTCCAATCCCAGTTCCTTTGCCCTTCTTCTCATTCACTGGCAACAAGGCATCGTTTGCCGGTGATCTCAACTTCTATGGCAAGGCTGGGGTTAACTTCTATACACAGATCAAGACAATAACACAGCAATGGAAGGATTCAACTGATGGTAGCAAGATTAACATGGCAATGCCAACCTCTCAAAAATAA 1614 0.4343 MLRLSIRRARMLNFLGPQISASGRSHFSTAVEPSSSKSNPPRVPNLIGGSFVDSKSSSVIDVINPATQEVVSQVPLSTDEEFKAAVSAAKKAYPLWRNTPITTRQRVMLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASVMLAELALEAGLPEGVLNIVHGTHDIVNAICDNDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATLNALVAAGFGAAGQRCMALSTVVFVGDAKSWKAKLVERAKALKVNAGTEPDTDLGPVISKQAKERIHKLVKSGVESGAKLLLDGRNIVVPGYESGNFIGPTILSDITTNMECYKEEIFGPVLLFMEADSLEEAISIINSNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTDGSKINMAMPTSQK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01678 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 496 IPR016162 GO:0016491
Viun3g01678 537 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 45 519 IPR010061 GO:0004491
Viun3g01678 537 SUPERFAMILY ALDH-like 38 520 IPR016161 GO:0016491
Viun3g01678 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 313 324 IPR016160 GO:0016491
Viun3g01678 537 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 12 535 IPR010061 GO:0004491
Viun3g01678 537 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 288 488 - -
Viun3g01678 537 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 47 294 - -
Viun3g01678 537 Pfam Aldehyde dehydrogenase family 51 515 IPR015590 GO:0016491
Viun3g01678 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 288 488 IPR016163 GO:0016620
Viun3g01678 537 CDD ALDH_F6_MMSDH 43 519 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01678 Viun-Chr3 11651693 11659145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01678 1 503 Aldehyde Dehydrogenase Gene Family AT2G14170 81.312 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01678 K00140 - gmx:100791508 982.245