Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01674 ATGGCAGGTTGTGATTGGCGTTTTGATCTTAATGCAATCACTCTGGGGTTTTGTTATGCAAGAGGAACCTTGGTGTTCCTCTTGATAATCCCTCTTGAAAAGGCTCTTTCACAACCATTTTCTTTTCATTACAACTTCAGAAACGGTGCGGACGTAGAACAGCTAAACCTGGAAGGAAATGTTTCTGTCTCAAATTCTGGCATCAACCTCGCAGTGGACCCAAACCATGGTGGAACTGGGAGTGTTGGGCGAGTCACAATTCCCCACCTTGTTAAACTATGGGACAAGACCTCGAAAGAAGAAGAAAGCTTCGTTACCCACTTTTCCTTTATGATCATCCCAAAAAAGAGTTCTCGTGGAGACGGTTTTGCTTTCTTTATAGCAAGCCCTAACCTCCCAAATGTGAAGGCAACGGATGAAATAAAGCGTGGAGGCCTTGGCATTGGTGTGGTGAATGGCACAGTTCCTCTCTCAAACGATTATCAATATGTGGCAGTGGAGTTTGACACTTTCTCAAACGATTGGGACCCTCAGGGCACACATGTGGGTGTGAATGTAAACTCTATGCGATCTGACGTAGTTGAGTATTGGAGAACAGATACTACTTCAAAAGGCCCTTATAAGTGTACCATTAAGTACAACTCCAAGGATCATTATCTGAACATTTCTTTCACTGGATTCAAGCCCAATGGAAATCGAGTATCACAGCACCTTCTTTACCCAATTGATTTGAGAAACTACTTGGAAGAGAGGGTTGTTGTAGGTATATCAGCTGCAACAGGAGATGGATTTGATCACCACACCTTGCTGGGATGGTCATTTAGTAAAAAAACAAGTAATAATGATAAGAAAGACAAGTTGGACAGGAGAATGTTGTTGGAGGGAATAGGAGTTGGTTTAGGTGGGGCTGTGAGTTTCTTTGTGTTGCTCCTCGTTGTACTGTGGAAGAGGGGCAAGAGACAAAAGGAAGAAGTCACTTCAGAAACCTCTTCTGATTTGAAAATGGATTATGAGTTCAAAATGAGTACTGGACCAAAGGAGATCAGATACGAGGTATTGGTATCTGCGACAAACAACTTTAAAGAGAGACACAAGCTGAGGCATTGTGTTTACAAAGGTTATTTCAAAGACATAAAGTCTTACGGTGCAATCCAGAGGATATCAGCAGGTTCATCACATGGTGTGGAGGAATATGCAGCGGAAGCAAGGATCATTAGCCAATTGAGGCACAGGAATTTGATGAAACTCGTGGGTTGGTGCCACAAGAAGAATGATCTCTTTCTGATATATGATTACATGCCAAACGGCAGCTTGTATTCTCATCTTTTTGGTGGAGAGAGTATCTTGTCGTGGCATGTGAGGTACAACATAGCTCTTGGCTTGGCCTCAGCATTGTATTACCTACAAGAAGAGTGGGGAAAATGTGTGCTTCATAGGGACATCAAATCAAGCAACATATTGTTGGACTGCAATTTCAATGCTAAGCTTGGGAATTTTGGCCTGGCAAGGCTGGTGGATCGTAAGAAAGTGTCAAAGACAACAGTTATGGCTGGAACAACGGGTTACCTTGACCCTGAATATGTTATCTCAGGCAAGGCTAGAAAGGAATCTGACATGTTCAGTTTTGGGGTTGTTTTGTTGGAGGTAGCAAGTGGAAGAAAAGCCATTGAGCAAGAAGAGAAAGAGGGTCAAGTGTCACTAGTTGAGTGGGTGTGGAAGCTATATGGACTTAGAAATGTCCTTGCAGCAGCAGATCCAAAGCTGAATGGTGAATTTGATGTGCAGCAAATGGAATGCTTGGTTGTTGTTGGTCTTTGGTGTGCAAATTCAGATAGCAGGAGAAGGCCCTCTATAAGGCAAGTGATTAAGGTGCTTAACTTTGAAGCTCCTTTTCCTGTCCTTCATCACCAACAACAACAGATGAGTTGTTTTTCACATTATGATCTTCCTTAA 1953 0.427 MAGCDWRFDLNAITLGFCYARGTLVFLLIIPLEKALSQPFSFHYNFRNGADVEQLNLEGNVSVSNSGINLAVDPNHGGTGSVGRVTIPHLVKLWDKTSKEEESFVTHFSFMIIPKKSSRGDGFAFFIASPNLPNVKATDEIKRGGLGIGVVNGTVPLSNDYQYVAVEFDTFSNDWDPQGTHVGVNVNSMRSDVVEYWRTDTTSKGPYKCTIKYNSKDHYLNISFTGFKPNGNRVSQHLLYPIDLRNYLEERVVVGISAATGDGFDHHTLLGWSFSKKTSNNDKKDKLDRRMLLEGIGVGLGGAVSFFVLLLVVLWKRGKRQKEEVTSETSSDLKMDYEFKMSTGPKEIRYEVLVSATNNFKERHKLRHCVYKGYFKDIKSYGAIQRISAGSSHGVEEYAAEARIISQLRHRNLMKLVGWCHKKNDLFLIYDYMPNGSLYSHLFGGESILSWHVRYNIALGLASALYYLQEEWGKCVLHRDIKSSNILLDCNFNAKLGNFGLARLVDRKKVSKTTVMAGTTGYLDPEYVISGKARKESDMFSFGVVLLEVASGRKAIEQEEKEGQVSLVEWVWKLYGLRNVLAAADPKLNGEFDVQQMECLVVVGLWCANSDSRRRPSIRQVIKVLNFEAPFPVLHHQQQQMSCFSHYDLP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01674 650 Pfam Protein kinase domain 370 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g01674 650 SUPERFAMILY Protein kinase-like (PK-like) 339 637 IPR011009 -
Viun3g01674 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 278 IPR013320 -
Viun3g01674 650 Gene3D Phosphorylase Kinase; domain 1 345 432 - -
Viun3g01674 650 Gene3D - 38 295 - -
Viun3g01674 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Viun3g01674 650 FunFam Lectin-domain containing receptor kinase A4.3 433 645 - -
Viun3g01674 650 ProSiteProfiles Protein kinase domain profile. 290 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g01674 650 ProSitePatterns Legume lectins beta-chain signature. 164 170 IPR019825 -
Viun3g01674 650 Pfam Legume lectin domain 40 285 IPR001220 GO:0030246
Viun3g01674 650 CDD lectin_legume_LecRK_Arcelin_ConA 40 275 IPR001220 GO:0030246
Viun3g01674 650 PANTHER - 64 629 - -
Viun3g01674 650 Gene3D Transferase(Phosphotransferase) domain 1 433 645 - -
Viun3g01674 650 SMART serkin_6 360 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01674 Viun-Chr3 11616194 11618146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01674 20 634 Receptor kinase-like Gene Family AT5G10530 40.981 1.79e-147 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun3g01674 Pkinase 1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01674 - - cam:101492002 644.425