Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01661 ATGGAGAACTATCAGTACCCCTCCTACCCTGACTCCGGCGACTCCTCGCCGCGCTCCAGGGAGATCGACTTCGAGAATCCGCCGCCCTGGGACGACCAGCAGACCCAGAACTACAAGGCCAAGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCCCGAACCCATGACAACCAGCTCTCCTACGTCGGCGGCGACACCAAGATCCTCGCCGTCGACCGCGCCATCAAGTTCCCTGCCTTCCTTTCCAAGCTCGCCGCGCTCTGTGACGCCACGCCGCAGGACCTCACCTTCAAGTACCAACTCCCTGGTGAGGACCTCGACGCCCTAATCTCCGTCACCAACGACGACGACCTTGAACACATGATGCACGAGTACGACCGTCTCTATCGCCCTAACTCAAAACCTGTCAGGATGAGACTCTTCCTCTTCACGCTTTCCTCAAACCCTAATTCCTCATTCTCCTCGGATCGTGATCGCTTCGTTGATGCTCTTAACTCTGCTCCAATTCCCCCGCAACCTGACCCCATCAAAACCCCTCCCGTTACTCCTTCCAATGTCGATTACCTCTTCGGCCTCGACAAGGCCGTTGCTCCTCCCACTCTCCCTCCTTCCTTCGCGGCCGTTAAGTTCCACGATCCCGCGCCGGAGCCAGTCGCGCCGCAGCCGGAGTATCAGGTCCGCGGTGGAATCTCCGTTTCTGATCGCGTCGTCGGATCGGATCCGAGTGCGAACTCGATCGAAATTCAGAGACAGTTGCAGCAGGAGATGCAGCGTTTGCAGATTGCTGAGAATGAATATCGGAGGAGGAGTGAGGATGGTTTCGCCGGCGGCTATGCCGCTGCGGGAGGGGATTATTACATGCAGAAGATGCCGGAGAAGGTTCCGCCTCCTAATGCGCCCCATCCCGGTGGGTACTGGCCGGAGAAGCAGTTTTCCGGCGAGGGTTTTCAGACGACAGTCACGACGGCTCCCGGAGGTGCTGATCAGCAGGTCTATGTTATCCCAGCGCCAGGGACGTTCTACCACGCGCCGGTGGTGAGGCCTCCGGCGGCGCAGGGCTACTACGCTGTGCAGAGAATGGGGTCTGAGGGTTTCCGTGAGCAGGCGGTGTTCGGAGGCGTCGCTCAGCAGAAGACTCCGTTTTCGTCGGCGGGGCCAGCGCAGCCGGTTAAGGCTTCGGGGTATGCTGAGGGATACGGCGTTGTTAGGCCTACTGGGGTGCCGGATAATGCAGCGTACGCGCAGGTGGCGTATGATAGTGCGAGTGGGAGGCAGGTTTACTATACTGCGCAAGGAGGTGTGGTGCACGCGCCGACGCAGTACCAAGGCGTTCCGCCGGTGGTGGGTTCGGATATTAGGCCGGTTGGGGTTTCGGTGGGCCAGGATGTTAAGGTGGTTAACAAGGTTAACCAAGGTTCTGTGTGA 1425 0.5937 MENYQYPSYPDSGDSSPRSREIDFENPPPWDDQQTQNYKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRAIKFPAFLSKLAALCDATPQDLTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRPNSKPVRMRLFLFTLSSNPNSSFSSDRDRFVDALNSAPIPPQPDPIKTPPVTPSNVDYLFGLDKAVAPPTLPPSFAAVKFHDPAPEPVAPQPEYQVRGGISVSDRVVGSDPSANSIEIQRQLQQEMQRLQIAENEYRRRSEDGFAGGYAAAGGDYYMQKMPEKVPPPNAPHPGGYWPEKQFSGEGFQTTVTTAPGGADQQVYVIPAPGTFYHAPVVRPPAAQGYYAVQRMGSEGFREQAVFGGVAQQKTPFSSAGPAQPVKASGYAEGYGVVRPTGVPDNAAYAQVAYDSASGRQVYYTAQGGVVHAPTQYQGVPPVVGSDIRPVGVSVGQDVKVVNKVNQGSV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01661 474 Coils Coil 245 272 - -
Viun3g01661 474 MobiDBLite consensus disorder prediction 1 15 - -
Viun3g01661 474 Gene3D - 60 144 - -
Viun3g01661 474 PANTHER OS05G0427100 PROTEIN-RELATED 9 351 - -
Viun3g01661 474 CDD PB1_UP2 43 143 - -
Viun3g01661 474 Pfam PB1 domain 55 143 IPR000270 GO:0005515
Viun3g01661 474 SUPERFAMILY CAD & PB1 domains 55 153 - -
Viun3g01661 474 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 59 145 - -
Viun3g01661 474 SMART PB1_new 54 145 IPR000270 GO:0005515
Viun3g01661 474 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01661 Viun-Chr3 11490927 11492525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01661 38 166 MAP Kinase Kinase Kinase AT5G57610 43.382 3.42e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01661 - - gmx:100810467 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01661 3 11490927 11492525 Viun6g02974 6 32662652 32664380 PCT