Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01658 ATGCTGGAGTCTTTAGCTTGGTGCCAAAGCTTTAAGGGATATGACCTTACCAAACAGAAGAGTCCGGGTTACTCTCATACTATTTCTCGAGTTTATAGAAATTCTATTTTTGTGCTTTATTCTGTCAACAAGAAAGTGCCGGTACTGCCACATGGTGCTAATCATGGGATATTTCATGGGAGTTCTGTGTCAGAAAATTTCTTTAAAAAGCCTCCTCTCTATGCCCCTTTAAGTTCTGGTTGGAAAGGTTTGTATAGGCCACGTTGGGAACGGCTGCAAACAAATGTAGCCTATGATGTTGCTGGAGCTGTTGATGTAATCAATGATTTAGGATTGGACACTCTTACCTTCTTGGCTGTGACAGTCATAATTGTGCCTGTGTTCAAGTCACTGAAAGCCAGTCCTATACTTGGCTTCTTTTGTGCTGGTGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAAGTTTTATCCGAATGGGGGATTCTTTTCTTGCTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTAAAAGCTCTCGCAAAATATGCTTTTGGAATGGGATTGGCTCAGGTTTTACTGTCTACTTTAGCATTTACTGCTTTTGAGCTTCCTCCAAATGGAGCTGTTGGAACAAAAATTTTGGAATTCCTTTTCCACTCTAGGCCTGACCTGGTGAACATAAGGAGTGTCGATGAAGCTGTAGTAATCGGTGCTGCTCTCTCTCTGTCATCATCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAGCTTCCTACAAGATTTGGTTCAGCAACTCTTGGAATACTTCTTCTGCAGGACTTAGCCGTTGTTCCTCTTTTAGTCATACTTCCAATACTAGAGAGCCAGAATATAACTGAGGGGAGTATTTGGCCCACGCTTGCTCAAGAAAGTTTAAAAGCTTTAGGTGGATTGGGTCTTCTTTCTCTTGGGACAAAGTACATTCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACAATTGCTGGAACTTCTCTAGGCACACAGAATTTGGGCTTTAGTGACACGCTTGGGGCTTTTTTAGCTGGGGCTATTTTGGCAGAGACAAACTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTGCTTGGATTGTTTTTTCTAACTACGGGAACTTCAATTGACATGCAGCTCCTTTTACGAGAGTGGCCAAATGTACTTTCACTCTTGGGAGGTTTAATTGTTATAAAGACACTGATCATAACTGCAATTGGTCCTCGTGTTGGGCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAATTTGGATTTGTTGTTTTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCTCTTGAGCTCAACAAGCTACTCATCATTGTTGTTGTATTGTCGATGGCATTAACCCCATTTCTGAACGAAGCTGGAAGAAGGGCTGCTAGTTTTATAGAAGAAAAATCTGATGCTGAGAATAACGAGAAAGCTTTGGAGACTGTTAACTTCAATGCTAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCCTGTCCAATCCATTAGCTTCAGGAGAAGGTGATGAAGTAGGATGGCCTTATGTGGCATTTGATCTGGACCCCAATGTAGTAAAGACAGCTAGAAAAATTGGCTTCCCTATAGTCTATGGGGATGGATCACGTCCTGATGTTCTTCAATCTGCTGGTGTCTCTTCTCCCAAAGCTTTTATGATTATGTACACCGGAAAGAAGAAGACAATTGATGCTGTTCAGAGGCTAAGATTGACATTTCCGGCGTGA 1899 0.4202 MLESLAWCQSFKGYDLTKQKSPGYSHTISRVYRNSIFVLYSVNKKVPVLPHGANHGIFHGSSVSENFFKKPPLYAPLSSGWKGLYRPRWERLQTNVAYDVAGAVDVINDLGLDTLTFLAVTVIIVPVFKSLKASPILGFFCAGVVLNQFGLIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVLLSTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILESQNITEGSIWPTLAQESLKALGGLGLLSLGTKYILRRVFEVVADTRSSEAFVALCLLTIAGTSLGTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLGGLIVIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEEKSDAENNEKALETVNFNASEPVVILGFGQMGQVLANFLSNPLASGEGDEVGWPYVAFDLDPNVVKTARKIGFPIVYGDGSRPDVLQSAGVSSPKAFMIMYTGKKKTIDAVQRLRLTFPA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01658 632 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 533 631 IPR036291 -
Viun3g01658 632 Gene3D - 534 632 - -
Viun3g01658 632 Pfam Sodium/hydrogen exchanger family 117 501 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun3g01658 632 Pfam TrkA-N domain 535 631 IPR003148 GO:0006813
Viun3g01658 632 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 97 631 - -
Viun3g01658 632 Coils Coil 500 520 - -
Viun3g01658 632 ProSiteProfiles RCK N-terminal domain profile. 534 632 IPR003148 GO:0006813
Viun3g01658 632 FunFam K(+) efflux antiporter 3, chloroplastic 109 508 - -
Viun3g01658 632 Gene3D - 109 509 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01658 Viun-Chr3 11450604 11460009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01658 1 631 Inorganic Solute Cotransporters AT4G04850 74.961 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01658 K03455 - gmx:100798214 1095.88