Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01622 ATGGCTTCCCGCAATCCCAGCAATAAAAGGGTGGGCCCCGAAGAAGCTTCTCTGGACAAGCGTCGCAGGGGCACCGCAGCTGAGAAAATGGAGCGACAGGGCGGTCCCGCTGCTGCTGGGAGGCCCAGAACACCGTTTTCCGTTGTCACAAATCGCTCTGACCTTAACACGACGAGTGATGTCACCGACGCGGTTGATTTCACGAAGGAGGAGGTGGAGGCTTTGTTGAATGAAAAGAAGAAGGGAAATACCTATGATAGTAAGAAAAAGATGGAGCAGATGACGGATCTTATTAAGCGCCTTAAGGCCTGCGTTCGCTGGTATAAAAGAATTGAAGAAGGGTATGTCCAAGAAAAGGAAAAGCTTCAGTCTGAGCTAGAGGCTTCTGAGAAGAAGTGCAGTGATACTGAGACTGAGATGAAGAATAAGATTGATGAGTTGAAGGAGGCTCTATCTGATTCGAGGAAGAAAATTTCTTGTCTAGAAGAGAGAATTGTGAAGGAAGAATCAGATAAATTGGAAGCGATTAATTCTTATGGTAAAGAAAAGGAAGTCAGAACTAAAGCTGAGAAAGTTCGGGATGAGAAGTCAGCTGAGCTTGAGAAAGTTCGGGATGAGAAATCAGTTGCTGAGAAGAAGGCCATTTCAAATGAAGATTTGTACAAGCGATCACAGGAGTATAATATGAGCTTGCAGCAGTACAATAGTCGTCTTCAGTTTGATCTTGAAACAGTTAATGAGGCCCTTAAACGGCTTGAAACTGAGAAAGCAACCATTGTTGAGAGTCTTAGCAATTTAAGAGGCCACAATAAGGCATTGCAGGATCAGTTGGTATCTCTTAAAGTTTCACAGGACGAGACTATAAAGCAGAAAGAAACTTTAGTAAATGAGCTAAAATGTCTTCGTGAGGAATTAAAGCAACTTAGAGATGACCGTGACCGTCAGTTGGAGCAAGTACAAGCTCTAACCGGAGAAATAGCGAGGCACAAAGAATATACTGGGAAAACATGTACCCAATTGGATACGTTGATGATTAAAACAAATGCTCTTGAGGAAACTTGTTCATCTCAAAAGGATCAAATAAATATACTGCAGCAGCAGTTGTTTGCTGAAAGAGAGAAATTAAAGAATTCTGATCTATCAGCTTCAGAAACAAGAACAATGTTCGAAGAGCAGAAGAGGATTATACAGGGGCTACAGGAGCGTTTGGCAGATAAAGAATTTCAAGTAGTAGAAGGAGAGAAGTTAAGAAAAAAACTGCATAACACTATTTTGGAGCTAAAAGGAAATATTCGTGTTTTCTGCCGTGTACGGCCGCTCCTATCGGATGACAGTGCGGACACGGCTGTTTCATTCCCTACTTCAACAGAAGCGCTTGGTCGGGGCATTGAATTGGTACAAAGCGGGCAGAAGTACAATTTCACATTTGACAAGGTGTTCAATCACGAGGCTTCTCAGCAGGACGTTTTTGTAGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGGTGTGCATCTTTGCATATGGACAGACGGGCTCAGGTAAAACCTACACTATGATGGGTAGGCCTGATGAGCCAGATCTGAAAGGGTTGATACCCCGTTCTTTAGAACAGATATTCCAGACTAGCCAGTCTCTAAAAGACCAAGGGTGGAGGTACACAATGCAGGCATCAATACTGGAAATATATAATGAGACCATCAGGGATTTGTTATTAACAAATCGGTCAAGTGATCATGCACGATCGGAAAATAGTGCTTCCAGCAAGCAGTACACTATCAAACATGATGCAAATGGAAACACACATGTTTCGGACCTCACAATTAAGGATGTTTGTAGCGCAGATGAGATTTCCTCCCTCCTGCGACAGGCAGCACAAAGCAGGTCAGTGGGAAGAACACAAATGAATGAACAGTCATCCAGAAGCCATTTTGTCTTTACACTGCGTATAAGTGGGAAAAATGAGAACACTGAACAACAAGTCCAAGGTGTCTTAAACCTGATCGATCTTGCTGGAAGTGAAAGACTCTCGAGGAGTGGGGCAACTGGAGACCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTTTATCGTCTCTGAGCGATGTCATATTTGCTTTGGGAGGAAAGAAAGAAGATCATATTCCTTTTAGGAATTCAAAGCTGACGTACCTTCTCCAGCCATGTCTCGGTGGCGACTCCAAAACGTTGATGTTTGTCAACATCTCACCTGATCAATCTTCCACTGGCGAGTCACTTTGTTCCCTCCGCTTTGCAGCCAGAGTCAATGCCTGTGAAATTGGGATTCCGCGGCGTCAGACTCAGACATCATCATCACGCTCCTCAGAATCCCGTTTGAGCTATGGTTAA 2376 0.4373 MASRNPSNKRVGPEEASLDKRRRGTAAEKMERQGGPAAAGRPRTPFSVVTNRSDLNTTSDVTDAVDFTKEEVEALLNEKKKGNTYDSKKKMEQMTDLIKRLKACVRWYKRIEEGYVQEKEKLQSELEASEKKCSDTETEMKNKIDELKEALSDSRKKISCLEERIVKEESDKLEAINSYGKEKEVRTKAEKVRDEKSAELEKVRDEKSVAEKKAISNEDLYKRSQEYNMSLQQYNSRLQFDLETVNEALKRLETEKATIVESLSNLRGHNKALQDQLVSLKVSQDETIKQKETLVNELKCLREELKQLRDDRDRQLEQVQALTGEIARHKEYTGKTCTQLDTLMIKTNALEETCSSQKDQINILQQQLFAEREKLKNSDLSASETRTMFEEQKRIIQGLQERLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLSDDSADTAVSFPTSTEALGRGIELVQSGQKYNFTFDKVFNHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDEPDLKGLIPRSLEQIFQTSQSLKDQGWRYTMQASILEIYNETIRDLLLTNRSSDHARSENSASSKQYTIKHDANGNTHVSDLTIKDVCSADEISSLLRQAAQSRSVGRTQMNEQSSRSHFVFTLRISGKNENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALGGKKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSTGESLCSLRFAARVNACEIGIPRRQTQTSSSRSSESRLSYG 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01622 791 Coils Coil 347 367 - -
Viun3g01622 791 MobiDBLite consensus disorder prediction 13 29 - -
Viun3g01622 791 MobiDBLite consensus disorder prediction 580 599 - -
Viun3g01622 791 MobiDBLite consensus disorder prediction 1 54 - -
Viun3g01622 791 Coils Coil 284 325 - -
Viun3g01622 791 Coils Coil 112 171 - -
Viun3g01622 791 Coils Coil 186 213 - -
Viun3g01622 791 PRINTS Kinesin heavy chain signature 636 653 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g01622 791 PRINTS Kinesin heavy chain signature 717 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g01622 791 PRINTS Kinesin heavy chain signature 503 524 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g01622 791 PRINTS Kinesin heavy chain signature 667 685 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g01622 791 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 765 IPR027417 -
Viun3g01622 791 Coils Coil 235 262 - -
Viun3g01622 791 SMART kinesin_4 428 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g01622 791 Pfam Kinesin motor domain 436 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g01622 791 ProSitePatterns Kinesin motor domain signature. 666 677 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun3g01622 791 CDD KISc_C_terminal 428 769 - -
Viun3g01622 791 PANTHER KINESIN-LIKE PROTEIN KLP-3 283 778 IPR027640 GO:0003777|GO:0007018
Viun3g01622 791 Gene3D Kinesin motor domain 373 769 IPR036961 -
Viun3g01622 791 FunFam Kinesin-like protein 376 769 - -
Viun3g01622 791 ProSiteProfiles Kinesin motor domain profile. 430 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01622 Viun-Chr3 11204405 11210342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01622 396 764 Calmodulin-binding Proteins AT5G65930 40.921 9.41e-78 271