Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01597 ATGGATGAGAAGATGCTGGTCTATGAGTACATGGAAAACAGAAGCCTTGATGCAATTTTGTTTGATAAGGCAAAAAAATCCTCCCTTGATTGGCAAACGCGCTTCAACATCATATGTGGCATTGCTAGAGGGCTTCTATATTTGCACCAAGATTCCAGATTTAGGATCATACACAGGGATCTCAAGGCAAGCAACATTCTACTTGACAAAGAGATGAACCCAAAGATATCAGACTTTGGTATGGCTAGAATTTTTGGCACGGATCAGATAGAAGCAAATACGATGAGAATTGTCGGAACATATGGATACATGTCCCCTGAGTATGCTATGGACGGAGTGTTCTCAGTAAAATCTGATGTTTTTAGTTTTGGGGTTCTTGTGCTGGAGATAGTAAGTGGAAAAAAGAACAGAGGATTCTATTTGGCAAACAAAGAATTGAATCTTCTAGGACATGCATGGAAGTTGTGGATAGAAGGAAATGCGTTGGAAGTGAGAGATTCGTGTATTGAGACATCATATTCAGCATCAGAAGTTCATAGATGCATACAAGTGGGTCTGTTGTGCGTGCAAGAGCGTGCAGAAGACAGGCCAACAATGTCTTCAGTGGTGTTGATGCTGAGTAGTGATACTGCATCAATGTCACAACCCAGAAACCCAGGGTTTTGTCTTGGAAGAAATCCTATGGAAACTGAATCTTCTTCAAGTAAACAAGAAGAATCATGCACTGTGAACCATGTCACTGTCACAATGATAGATGCTAGGTAG 765 0.4092 MDEKMLVYEYMENRSLDAILFDKAKKSSLDWQTRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTDQIEANTMRIVGTYGYMSPEYAMDGVFSVKSDVFSFGVLVLEIVSGKKNRGFYLANKELNLLGHAWKLWIEGNALEVRDSCIETSYSASEVHRCIQVGLLCVQERAEDRPTMSSVVLMLSSDTASMSQPRNPGFCLGRNPMETESSSSKQEESCTVNHVTVTMIDAR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01597 254 SUPERFAMILY Protein kinase-like (PK-like) 4 236 IPR011009 -
Viun3g01597 254 SMART serkin_6 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g01597 254 Pfam Protein tyrosine and serine/threonine kinase 3 204 IPR001245 GO:0004672|GO:0006468
Viun3g01597 254 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 253 - -
Viun3g01597 254 PIRSF ILK 2 219 - -
Viun3g01597 254 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 11 214 - -
Viun3g01597 254 Pfam Domain of unknown function (DUF3403) 208 254 IPR021820 GO:0004674
Viun3g01597 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 56 68 IPR008271 GO:0004672|GO:0006468
Viun3g01597 254 Gene3D Transferase(Phosphotransferase) domain 1 11 218 - -
Viun3g01597 254 ProSiteProfiles Protein kinase domain profile. 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01597 Viun-Chr3 10837563 10839270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01597 2 254 Receptor kinase-like Gene Family AT4G11530 57.364 9.85e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun3g01597 PK_Tyr_Ser-Thr 3.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01597 - - aprc:113860154 463.766