Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01567 ATGCACGGAAGGTATGGCGAGAGATCGAGTGGCGCGGGGAGAGAGAAGCGAGGTTTGGATTCGGCTTCGGCCGAAGAAGGTCAACCTGATCGGAAACGACCTGCTTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTTGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTCGAGCGTGCTTTGGCAAAACTATGCCCCTCCAAGATTGCTGGCAGGTCTTCCCCAAAGCGAATAGAAGGCCCTGATGGCACAAATTTACAATTGCAGTTCAAGACCAGGCTGTCCCTTCCCCTCTTTACAGGTGGAAAGGTGGAGGGAGAGCAAGGTTCAACAATTCATATTGTTTTGATTGATGCAAACACTGGCAATATTGTCACATCAGGGCCAGAGTCATGTGTCAGGCTAGATGTTATTGTACTGGAGGGAGATTTCAATAACGAGGATGATGATAATTGGACTGAAGAAGAATTTGATAGTCATATTGTGAAGGAGCGGGAAGGAAAAAGGCCTCTTCTAACTGGTGATCTGCAAATCACACTGAAGGAAGGTGTAGGAACACTGGGTGAGCTTACGTTTACGGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGCCTCAAAGTTGCCTTGGGTTGTTGTGAGGGAATGCGTATCCGTGAAGCCAAATCAGAACCTTTCACCGTTAAGGATCATCGCGGAGAATTATACAAGAAGCACTACCCTCCTGCCTTGAATGACGAGGTCTGGAGACTGGAGAAAATTGGCAAGGATGGGTCATTTCACAAAAGGCTAAATAAAGCTGGAGTATATACTGTTGAAGACTTCTTAAGACTTGTGGTCAGAGACCCTCAGAGACTGCGGAATATCCTTGGAAGCGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAGCATGCCAAGACTTGCGTTCTCAGTGGAAAACATTATGTGTACTATCCTGAAGATGCAAGAAATGTGGGTGTTGTTTTCAATAATATTTATGAATTAAGTGGCTTAATTGCCAACGATCAATTTTACTCAGCTGAATCTCTCTCTGAGAATCAAAAGGTTTATGTAGACACATTGGTGAAGAAAGCATATGATAATTGGATGCATGTTATTGAGTATGATGGGAAATCTCTGGTAAATGACATTGAGGATAAGACTTTGGACACCGCTCATCCTCAGGCACCAATGATTTCCCATGAATATTCAAACTCCCTTCAGCAGATACCCATCCCAGCTTTGCCACTTCCAGGACATGCTGGCCAGCCTTCAATGGATTCAGGAGTAACAGTTGGAGGTTATCATGATGGAACAACTTCTAGATTCTCCTTGCAACCACAGAATCCCAGTCTTAACTCTTCCATTCAGTTTGATGATAACGCATTTTCTCTTCAAAACCAATTGATGAGTGTTCCACACCATGCCCAACTTCCAAGAAATGAGAATGGACTAACTGTTGGTCCTGCACAATCATCCACACATGGGTTTGAGCCTGTCAGCATTTCAAATCCTACATATAGAGGAGTTGAAGAATACTTCCCTGAGGAAGAAATTCGTATTAGAAGTCACGAGATGCTAGAAAATGAAGATATGCAGCATCTACTCCGTATGTTTAACATGGGGGGCCAACCAAATCCTGCCTTTAATGGCCATGAAGATGGGTACCACCCTGGTTCATCTACATACATTTCTGCAAACCCCATGGGCTATAATTTTGATGATGAACCAAATCGGTCCTCAGGCAAAGCTGTTGTAGGCTGGCTCAAGCTGAAGGCAGCATTAAGATGGGGGATTTTTATTCGGAAGCAAGCTGCTGAGAGACGAGCGCAACTTGTTGAATTGGACGACCCATAG 1899 0.4444 MHGRYGERSSGAGREKRGLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLCPSKIAGRSSPKRIEGPDGTNLQLQFKTRLSLPLFTGGKVEGEQGSTIHIVLIDANTGNIVTSGPESCVRLDVIVLEGDFNNEDDDNWTEEEFDSHIVKEREGKRPLLTGDLQITLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVALGCCEGMRIREAKSEPFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGVYTVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKHYVYYPEDARNVGVVFNNIYELSGLIANDQFYSAESLSENQKVYVDTLVKKAYDNWMHVIEYDGKSLVNDIEDKTLDTAHPQAPMISHEYSNSLQQIPIPALPLPGHAGQPSMDSGVTVGGYHDGTTSRFSLQPQNPSLNSSIQFDDNAFSLQNQLMSVPHHAQLPRNENGLTVGPAQSSTHGFEPVSISNPTYRGVEEYFPEEEIRIRSHEMLENEDMQHLLRMFNMGGQPNPAFNGHEDGYHPGSSTYISANPMGYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKQAAERRAQLVELDDP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01567 632 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Viun3g01567 632 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Viun3g01567 632 PANTHER OS02G0177800 PROTEIN 15 546 IPR012416 GO:0005516
Viun3g01567 632 MobiDBLite consensus disorder prediction 1 32 - -
Viun3g01567 632 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01567 Viun-Chr3 10490328 10497083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01567 14 627 Calmodulin-binding Proteins AT5G57580 61.682 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01567 - - gmx:100812605 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01567 3 10490328 10497083 Viun6g02870 6 32134622 32140034 PCT