Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01565 ATGTCTTCATCAAAGGCCATGAGCTTCACAAACTTTTACCAAAACTCAGTTACTGTCATGGAGCCCGCAGAGGAATGTCTGGAGTTCGAAGTTGGTTTTTATGAGCAATGGGGTAAAATGCTACTGCTGGGGACCAACTTCTTTAGCGATCCGAAAGGAAATACCATAAATATAGAGTTTGAGGAGGGTCTTTTGGGTCAGAGACAGTTTCGTGGTGTCCAGAGCATTCGGTCTTTTTATAACGTCAACGATGTTTATTATGTGTGTACTGTTTACTGTGGAGACCAATTTTTTCGTATAAGGCTTTTTGATCTGGACTGGAAGGAGTTTGACTACCCTGGTACAGCAAAGACTTCTCTTGGTTGTAACCCTTTGTCTTCAATAAGGTTTTTCCAAGCGTTTAGGGTGCAGTTTATCCCAGCGACGATGTTGATTACTGTCCCAGATTACTTTCAAATATTCTGTCGGGATAAACTTGCGTTTCATTACGCGATCAAGTTGTATGATCCCCTGTCAAAGATGTTTGAAATATATGTCGATAAAGATGAGAATTTGAGGATGGTCCTGTTTGGTTTTAGTAGGTGCATTCCATATTATGGGTTGACTGGTCCGTGTTACTTACATTTAAACTATGTAGGAAACAATGTATTTCTTCATAGGATATTCTTGGCTGAAGGAGTAGAAATGGATTATAACAGAAATTCGGGCAGTGCTGCAAACACCCAAGTTCCAGTTGCTGCTCCTGATTTTGAGAAAGTATTAAGCAATTATGATGTTAAAGCATCTTCTTTGTATCTGGATTCCAAATTTGCAAAAGAATGCTTGATCAAGGGTCGCAAGAGCTACAGATTGACGAATGACCAATCTCAATTCTGGGACTGTAAGATACGTTGGACGGGCAGAAGTTCGTATGAGTGTTACTTGACCTGTGGTTGGAAGAAGTTTTGCAAAGAAAACAGATTGGCTGCTGGTGATCGGATAAGATTTGTTGTGGAGGATGAAGAAAAGGGCGTAATCCATATATTGAAGAATTAG 1035 0.401 MSSSKAMSFTNFYQNSVTVMEPAEECLEFEVGFYEQWGKMLLLGTNFFSDPKGNTINIEFEEGLLGQRQFRGVQSIRSFYNVNDVYYVCTVYCGDQFFRIRLFDLDWKEFDYPGTAKTSLGCNPLSSIRFFQAFRVQFIPATMLITVPDYFQIFCRDKLAFHYAIKLYDPLSKMFEIYVDKDENLRMVLFGFSRCIPYYGLTGPCYLHLNYVGNNVFLHRIFLAEGVEMDYNRNSGSAANTQVPVAAPDFEKVLSNYDVKASSLYLDSKFAKECLIKGRKSYRLTNDQSQFWDCKIRWTGRSSYECYLTCGWKKFCKENRLAAGDRIRFVVEDEEKGVIHILKN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01565 344 SMART B3_2 250 344 IPR003340 GO:0003677
Viun3g01565 344 SUPERFAMILY DNA-binding pseudobarrel domain 248 341 IPR015300 -
Viun3g01565 344 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 190 333 IPR039218 -
Viun3g01565 344 Pfam B3 DNA binding domain 250 342 IPR003340 GO:0003677
Viun3g01565 344 ProSiteProfiles B3 DNA-binding domain profile. 249 344 IPR003340 GO:0003677
Viun3g01565 344 Gene3D - 231 344 IPR015300 -
Viun3g01565 344 CDD B3_DNA 248 343 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01565 Viun-Chr3 10482359 10483829 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Viun3g01565 B3 4e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01565 - - vun:114170692 695.271