Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01534 ATGACTACTTTACACACCTTTCTGCTTTTACTTTTCCTATCTTATAAACCTGCTCTTTCATTTTCTTCTAGACATAGTCAATATTGGGGTGGTGGCAGGATTTTGAGCTCTGCTTATAATGCTGATCTTGTCACTAACCTACCTGGCCAACCCAAGGTGAATTTCCAGCACTATGCTGGATATGTCACAGTCAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTCTATGAGGCCATCACCAACCCAGAAGAGAAACCATTGGTGCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATACGGAGCAACACAGGAGATTGGTCCATTTTTAGTGGACACTGATGGCCATGGCCTCAAATTTAATAACTTCTCATGGAATAGAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCATACTCAAATACAAGCCGTGACTATGACCAATTGGGAGATGATTTAACAGCGAACGATGCTTACTCTTTTCTCCACAACTGGTTCCAAAAGTTTCCATCATACAGAACGAGGGCGTTTTACATAGCAGGAGAGAGTTATGCAGGAAAGTATGTACCAGAGCTGGCTGAACACATCCATGATAGGAACAAGGACCCCTCTCTCTATATTGATCTCAAGGGTATTCTGTTGGGTAACCCTGAAACATCTGATGCTGAGGACTGGATGGGGCTGGTTGATTATGCTTGGAGCCATGCTGTGATATCTGATGAAACTCATAAAATAATAAAAACAAGTTGTGACTTTAACAGCACCGATCCATGGCGTAACGAAGATTGTAGTGAAGCTGTGGATGAAGTACTCAGACAATACAATGAAATTGATATCTACAGTCTCTACACCTCTGTCTGCTTTGCCAGCACAGCACGTTCAGACGATCAATCCATGCAAACTTCCATGAAGCTAACATCTAAAATGATGCCTAGGATGTTGGGTGGCTATGATCCATGCCTTGATGACTATGCTAAAGCTTTTTATAATAAACCAGATGTTCAGAAGGCTCTTCATGCCAGTGATGGTCAGAATCTAAAGAATTGGACCATTTGCAACAACAAGATATTCAATGACTGGGCAGATTCAAAGCCATCTGTTATTCCAATTTACAAGAAGCTTATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACAGATGGTAGAGTACCAGTGTTGTCCACAAGATACAGTTTAAGCTCTCTTTCCTTGTCTGTCACTAAATCATGGAGGCCTTGGTACCATGAAAATGAGGTTAGTGGATGGTTTGAAGAATACGAGGGGCTTACATTTGCAACGTTTCGAGGAGCTGGGCATGCAGTTCCCTGTTTTAAACCAAGCAATTCACTTGCGTTCTTCACTTCCTTTCTCAATGGAGAATCACCACCTTCTACAAAATAA 1431 0.4214 MTTLHTFLLLLFLSYKPALSFSSRHSQYWGGGRILSSAYNADLVTNLPGQPKVNFQHYAGYVTVNETNGRALFYWFYEAITNPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGHGLKFNNFSWNREANMLFLESPVGVGFSYSNTSRDYDQLGDDLTANDAYSFLHNWFQKFPSYRTRAFYIAGESYAGKYVPELAEHIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHKIIKTSCDFNSTDPWRNEDCSEAVDEVLRQYNEIDIYSLYTSVCFASTARSDDQSMQTSMKLTSKMMPRMLGGYDPCLDDYAKAFYNKPDVQKALHASDGQNLKNWTICNNKIFNDWADSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSSLSLSVTKSWRPWYHENEVSGWFEEYEGLTFATFRGAGHAVPCFKPSNSLAFFTSFLNGESPPSTK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01534 476 FunFam Carboxypeptidase 375 469 - -
Viun3g01534 476 Gene3D - 328 364 - -
Viun3g01534 476 Gene3D - 375 469 - -
Viun3g01534 476 FunFam Carboxypeptidase 38 297 - -
Viun3g01534 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 456 IPR001563 GO:0004185|GO:0006508
Viun3g01534 476 FunFam Carboxypeptidase 325 471 - -
Viun3g01534 476 Gene3D alpha/beta hydrolase 38 297 IPR029058 -
Viun3g01534 476 SUPERFAMILY alpha/beta-Hydrolases 41 470 IPR029058 -
Viun3g01534 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Viun3g01534 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Viun3g01534 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Viun3g01534 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Viun3g01534 476 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Viun3g01534 476 Pfam Serine carboxypeptidase 48 469 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01534 Viun-Chr3 10251402 10254680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01534 333 470 Calmodulin-binding Proteins AT2G22960 33.813 5.78e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01534 K16297 - gmx:100815993 902.894