Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01527 ATGGCTTACCGGCGTTGCCTTTTGATGAGAGGGAGCCTTGTAGATCGGAGGTTCCATCCATCTTTCAGTTATGTTCTTCATAGCGATGAAGGGAGACAGGAAAAGTCTGAGGAAAAATCATCTTCAGCAGGCGTTAGTAATTTTGCCCAGATAAGGTCCTTTGGAAGCTCTCTTAATGGACCACTGGGGTTCTCTGCTCCTTCCCGAGATAAGTTTATTTCTCCATGCACTGGATATGGTTTCTGCCGGTATATGTCGACAGTGAATCAGGGTTCAGATAAGATGGACAGTGACATACTCACTGATGTAGCTGATGTACTCACTGACACTACCATAGACACTATAGCTTCTCAGGCTGCCATTACTAATGAGGTTGCAATTGCTGCCGCCGATTCTTTTTTTCCTGTAATGGGCTTGCAGTACGTGATAGATGCTGTGCATTCCTACACTGGCTTAAACTGGTGGGCAGCAATAGTTCTTACAACCCTGTTGATTCGAAGTGCTACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAACTTACGTTAATGAGGCCCCACTTGGAGGAGATAAAGCAGCAGATGGACGGGATGGCTATGGATCCTGCAGCTGTTGCTAAAGGTCAGCAGCAAATGAAGAAGCTATTTAAGGAATATGGTGTGAGCCCTTTTACGCCATTGAAAGGACTCTTTATTCAAGGCCCTATTTTTGTTAGTTTTTTTCTTGCGATAACAAATATGGCTGAAAAAGTGCCATCATTCAAGCATGGTGGAGCTTATTGGTTTACTGATCTCTCAACTCCAGATGCCTTGTACGTTTTTCCAGTTTTGACTGCATTGTCATTCTTAATAACGGTAGAGTGTAATATGCAAGAAGGGATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATGTCTCCAGAGGTCTTGCGGTTCTTACGGTTCCTTTCACCATGGGATTTCCAAAGGCAATATTCTGTTACTGGGTTACGTCAAATTTGTTTTCACTTGTATATGGACTTGCGCTTAAAGTTCCTGGTGTAAAGAAAACATTGGGTATTCCTGAAATACCTGTTACTGCCCCCACCAGTGCTCCTCAATCGCCCTTTTCTATATTTCCCGCTCTAAAACAAGCTACCTCTGCGACAAATGAGTCAAGCCCAGTAGTACCTGATAAACCTTCAAAACATTTAAATACAAAGATATCATCTTCTGCTGTTATTAGTCAAAGGCTTAGAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAACAAGTGA 1287 0.4242 MAYRRCLLMRGSLVDRRFHPSFSYVLHSDEGRQEKSEEKSSSAGVSNFAQIRSFGSSLNGPLGFSAPSRDKFISPCTGYGFCRYMSTVNQGSDKMDSDILTDVADVLTDTTIDTIASQAAITNEVAIAAADSFFPVMGLQYVIDAVHSYTGLNWWAAIVLTTLLIRSATVPLLINQLKATSKLTLMRPHLEEIKQQMDGMAMDPAAVAKGQQQMKKLFKEYGVSPFTPLKGLFIQGPIFVSFFLAITNMAEKVPSFKHGGAYWFTDLSTPDALYVFPVLTALSFLITVECNMQEGMEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLALKVPGVKKTLGIPEIPVTAPTSAPQSPFSIFPALKQATSATNESSPVVPDKPSKHLNTKISSSAVISQRLRSLEKQVKGRKKNK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01527 428 Pfam 60Kd inner membrane protein 154 340 IPR028055 -
Viun3g01527 428 CDD 5TM_Oxa1-like 151 348 - -
Viun3g01527 428 NCBIfam membrane protein insertase YidC 153 340 IPR028055 -
Viun3g01527 428 PANTHER OXA1 112 422 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01527 Viun-Chr3 10118590 10130634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01527 157 352 Chloroplast and Mitochondria Gene Families AT2G28800 24.378 2.12e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01527 K03217 - gmx:100792907 717.613