LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun3g01525	ATGGCTTACCGGCGTTGCCTTTTGATGAGAGGGAGCCTTGTAGATCGGAGGTTCCATCCATCTTTCAGTTATGTTCTTCATAGCGATGAAGGGAGACAGGAAAAGTCTGAGGAAAAATCATCTTCAGCAGGCGTTAGTAATTTTGCCCAGATAAGGTCCTTTGGAAGCTCTCTTAATGGACCACTGGGGTTCTCTGCTCCTTCCCGAGATAAGTTTATTTCTCCATGCACTGGATATGGTTTCTGCCGGTATATGTCGACAGTGAATCAGGGTTCAGATAAGATGGACAGTGACATACTCACTGATGTAGCTGATGTACTCACTGACACTACCATAGACACTATAGCTTCTCAGGCTGCCATTACTAATGAGGTTGCAATTGCTGCCGCCGATTCTTTTTTTCCTGTAATGGGCTTGCAGTACGTGATAGATGCTGTGCATTCCTACACTGGCTTAAACTGGTGGGCAGCAATAGTTCTTACAACCCTGTTGATTCGAAGTGCTACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAACTTACGTTAATGAGGCCCCACTTGGAGGAGATAAAGCAGCAGATGGACGGGATGGCTATGGATCCTGCAGCTGTTGCTAAAGGTCAGCAGCAAATGAAGAAGCTATTTAAGGAATATGGTGTGAGCCCTTTTACGCCATTGAAAGGACTCTTTATTCAAGGCCCTATTTTTGTTAGTTTTTTTCTTGCGATAACAAATATGGCTGAAAAAGTGCCATCATTCAAGCATGGTGGAGCTTATTGGTTTACTGATCTCTCAACTCCAGATGCCTTGTACGTTTTTCCAGTTTTGACTGCATTGTCATTCTTAATAACGGTAGAGTGTAATATGCAAGAAGGGATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATGTCTCCAGAGGTCTTGCGGTTCTTACGGTTCCTTTCACCATGGGATTTCCAAAGGCAATATTCTGTTACTGGGTTACGTCAAATTTGTTTTCACTTGTATATGGACTTGTCTTCTGTCTGTCCATGATGATCCAAAACAATCCAAGATGCACTTGCAAGTTACAGTCTTGCACTCTTAATACTGATTGA	1110	0.4297	MAYRRCLLMRGSLVDRRFHPSFSYVLHSDEGRQEKSEEKSSSAGVSNFAQIRSFGSSLNGPLGFSAPSRDKFISPCTGYGFCRYMSTVNQGSDKMDSDILTDVADVLTDTTIDTIASQAAITNEVAIAAADSFFPVMGLQYVIDAVHSYTGLNWWAAIVLTTLLIRSATVPLLINQLKATSKLTLMRPHLEEIKQQMDGMAMDPAAVAKGQQQMKKLFKEYGVSPFTPLKGLFIQGPIFVSFFLAITNMAEKVPSFKHGGAYWFTDLSTPDALYVFPVLTALSFLITVECNMQEGMEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLVFCLSMMIQNNPRCTCKLQSCTLNTD	369

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun3g01525	369	Pfam	60Kd inner membrane protein	154	341	IPR028055	-
	Viun3g01525	369	PANTHER	OXA1	111	345	IPR001708	GO:0016020\|GO:0032977
	Viun3g01525	369	CDD	5TM_Oxa1-like	151	345	-	-
	Viun3g01525	369	NCBIfam	membrane protein insertase YidC	153	340	IPR028055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun3g01525	Viun-Chr3	10118587	10129810	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun3g01525	157	338	Chloroplast and Mitochondria Gene Families	AT2G28800	24.599	2.56e-08	53.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun3g01525	K03217		-	gmx:100792907	593.964