Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01517 ATGCTTTTCTTCACCATCTTTCTTCTCTTCCTTTCCGTTGTTTTCATCATCATCAAACTGTGTTCCAATGAAGCAAACACCAAAAACTCACCCCCTTCACCTCCAAGGTTACCTCTACTGGGCAATCTCCACCAACTTGGTTTGTTCCCACACCGCACACTCCAAACTTTGGCTCAAAACTATGGATCTCTCATGCTACTCCACTTGGGGAAGGTACCAGTGCTTGTGATCTCATCTGCTGATGCAGCACGTGAGGTGATGAAAACTCATGACCTGCTCTTCTCAGACAGACCACAACGTAAGATGCACGATGTACTCTTGTACGGTTCCAAAGATCTTGCAAGTTCCACGTACGGAGAATACTGGCGGCAGATAAGGAGTGTGAGCGTTTTGCACCTTCTGAGTACCAAAAGGGTTCAGTCCTTTCGCCGTGTGAGGGAGGAGGAAACTGCCAGAATGACGGAAAACATTAGGCAGTGTTGCCGTGATTCGTTGCCGGTGAATTTAACTGACATTTGTGCTTCGGTTACGAACGATGTGGCGTGTAGAGTGGCTCTCGGAAGGAGGTACCGTGGAACAGAAGGGAGGGGGTTTCAGAAGCTGTTGTTGGAGTTTGGGGACTTGTTGGGTGCAGTGTCTATAGGGGACTATGTTCCTTGGCTTCATTGGGTGAGCCACGTTAGTGGTTTTGGTTTGTTTCAGAGAGCCAATAAAGTTGCCAAACATTTGGACCAGTTTATAGATGAAGTGATCGAGGAGCATATTATTAGGAATGGAAGATATGGGGTTGTTGATTCTGGGGACCACGATGATTTTGTGGATGTTTTGCTTTCGATGGAAAAGAATAACGCTAACACCACCGATTCCCTGATTGATAGAACTGCAATAAAGGCTTTGATACTGGACATGTTTGTTGCTGGTACTGACACAACTTACACATCCCTGGAGTGGACAATGTCAGAACTGTTAAAGCACTCAAGTGTGATGCAAAAATTGCAAGAGGAGGTGAGAAGTGTGGTGGGTAACAGGACTCATGTGACTGAGGATGATTTGGGTGAAATGAAGTACTTGAAGGCTGTGATCAAAGAGAGTCTTCGGCTTCATCCACCAATTCCATTAACAGTCCCTAGGAGATGCATGGAAGATGTGAAAGTGAAAGGGTATGAGATTGGAGCTGGCACTCAGGTGTTGGTGAATGCATGGGCCATTGCAAGAGACTCTTCATGTTGGGACCAGCCTCTTGAGTTTAAACCGGAAAGGTTTCTAAGCAGTTCCATAGACTTCAAAGGACATGATTTTGAGCTTATTCCATTTGGGGCAGGAAGAAGGGGTTGCCCTGGAATATCATTTGCCACAAAAATTGTTGAGATAGTAATAGCAAACCTTGTCCACCAGTTTGATTGGTCATTGCCTGGTGGGGCAAGTGGGGAGGACTTGGATATGTCTGAAATTCCTGGCCTTGCTGTTCATAGAAAATTTCCTCCTCTGGCTGTAGCCACTGCATATGAGAGAAATTAG 1518 0.4578 MLFFTIFLLFLSVVFIIIKLCSNEANTKNSPPSPPRLPLLGNLHQLGLFPHRTLQTLAQNYGSLMLLHLGKVPVLVISSADAAREVMKTHDLLFSDRPQRKMHDVLLYGSKDLASSTYGEYWRQIRSVSVLHLLSTKRVQSFRRVREEETARMTENIRQCCRDSLPVNLTDICASVTNDVACRVALGRRYRGTEGRGFQKLLLEFGDLLGAVSIGDYVPWLHWVSHVSGFGLFQRANKVAKHLDQFIDEVIEEHIIRNGRYGVVDSGDHDDFVDVLLSMEKNNANTTDSLIDRTAIKALILDMFVAGTDTTYTSLEWTMSELLKHSSVMQKLQEEVRSVVGNRTHVTEDDLGEMKYLKAVIKESLRLHPPIPLTVPRRCMEDVKVKGYEIGAGTQVLVNAWAIARDSSCWDQPLEFKPERFLSSSIDFKGHDFELIPFGAGRRGCPGISFATKIVEIVIANLVHQFDWSLPGGASGEDLDMSEIPGLAVHRKFPPLAVATAYERN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01517 505 CDD CYP71-like 61 494 - -
Viun3g01517 505 PANTHER CYTOCHROME P450 71B11-RELATED 13 500 - -
Viun3g01517 505 Pfam Cytochrome P450 31 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Viun3g01517 505 FunFam Cytochrome P450 83B1 17 498 - -
Viun3g01517 505 SUPERFAMILY Cytochrome P450 31 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01517 505 Gene3D Cytochrome P450 16 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01517 Viun-Chr3 10028994 10030911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01517 1 502 Cytochrome P450 AT3G48280 49.304 8.44e-176 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01517 - - var:108336564 886.715