Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01498 ATGTACGTAGCTTCCATGCGTAAGTCTTTCAAGGACTCCTTGAAAGTCCTTGAAGCTGACATCCAGCATGCCAACACCCTGGCGTCAGATTTTCCAAGGGAATATGATGGTGCATGCCTTCAGATGAGAATGTCATACAGTCCAGCAGCGCACTTGTTTCTATTTCTGGTGCAATGGACAGATTGTCATCTTGCTGGGGCCCTTGGACTGTTAAGAATCCTAATTTACAAGGTCTATGTGGATGGAACAACCACCATGTCTACACATGAAAGAAAAGCAAGTATTAGAGAATTCTATGCGGTCATATATCCCTCTTTATTGCAACTTCAGAAAGGTATCACTGATACTGAGGATAAGAAGCAAAAGGCTGTATGCATGGAGAGGTATCGCAGAAGAGATGATGAGGATTATAGACAGTCTTCTGACATTGACATTGAAAGAGAAGATGAGTGTGGAATATGCATGGACATGAATACCAAGATTGTCTTACCCAACTGCAACCATGCCATGTGCCTGAAATGTTACCGAGAATGGTGCAATTACACGGCACTGTGCATATGA 561 0.4296 MYVASMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGITDTEDKKQKAVCMERYRRRDDEDYRQSSDIDIEREDECGICMDMNTKIVLPNCNHAMCLKCYREWCNYTALCI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01498 186 PANTHER RING FINGER PROTEIN 41, 151 8 179 - -
Viun3g01498 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 186 IPR013083 -
Viun3g01498 186 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Viun3g01498 186 SUPERFAMILY RING/U-box 139 185 - -
Viun3g01498 186 ProSiteProfiles Zinc finger RING-type profile. 151 185 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01498 Viun-Chr3 9838764 9842287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01498 K25840 - gmx:100777318 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01498 3 9838764 9842287 Viun6g02804 6 31751285 31755639 PCT