Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun3g01457 | ATGGAGGAGATTTCAGGTTCAGGGTACAAGGAATATGTTGCTGGCTGTCTCGCCGGTGTTGCCGCTGTAGCCTCTGGCCACCCATTTGACACCGTCAAGGTGATGCTGCAAAAGCACAATGCAGAAGCACATATGATTCAGTACAGAAATGGATTGCATTGCACTGCTAGGATATTAAAGACAGAAGGAATCAAAGGACTTTATAGAGGAGCAACATCATCTTTTGTTGGGATGGCAGTAGAAGGATCACTATTTTTTGGTATTTATTCCCAAACAAAAATGTACCTTCAGGGGGGAGTTCAAAGTGAGGAACCACGGCCACAAGTAATAATACCATCTGCAGCTTATAGTGGTGCCATCATCAGTTTTGTGTTAGGTCCAACAGAGCTGATAAAGTGTAGGATGCAGATACAAGGCACTGACTCTTTGGTTCCCAAGTCCAGTAGATACAGTAGTCCCCTTGATTGTGCTCTTAAAACAGTAGAAACTGAAGGGGTGAAAGGAATTTTTCGTGGAGGTTGTACAACATTGCTTAGAGAATCTATAGGGAATGCTGTCTTTATGAGTGTTTACGAATATGTGCGTCATCAAATGCATTCAAATATCAAAGTTTCTTCATCCAATTACAGCAACCTGGTTGATATTGGAATCGGAATTGCTGCTGGTGGTCTTGGTGGCGTTGGTTTTTGGTTGACGGTTTTGCCTCTTGACGTGGCAAAGACTTTAATTCAGACAAACCCTGACAAAAACTGTCCAAGAAATCCTTTCCGGGTCTTGAGTTCGGTCTACCAAAGGGCTGGATTGAAGGGGTGCTATGCGGGTTTAGGTCCTACTATAAGTCGAGCATTTCCTGCTAATGCTGCAACAATTGTGGCGTGGGAGTTCGCATTGAAAATGCTAGGCATAAGGCGTGACTAA | 918 | 0.4368 | MEEISGSGYKEYVAGCLAGVAAVASGHPFDTVKVMLQKHNAEAHMIQYRNGLHCTARILKTEGIKGLYRGATSSFVGMAVEGSLFFGIYSQTKMYLQGGVQSEEPRPQVIIPSAAYSGAIISFVLGPTELIKCRMQIQGTDSLVPKSSRYSSPLDCALKTVETEGVKGIFRGGCTTLLRESIGNAVFMSVYEYVRHQMHSNIKVSSSNYSNLVDIGIGIAAGGLGGVGFWLTVLPLDVAKTLIQTNPDKNCPRNPFRVLSSVYQRAGLKGCYAGLGPTISRAFPANAATIVAWEFALKMLGIRRD | 305 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun3g01457 | 305 | Pfam | Mitochondrial carrier protein | 219 | 300 | IPR018108 | - | |
| Viun3g01457 | 305 | Pfam | Mitochondrial carrier protein | 113 | 199 | IPR018108 | - | |
| Viun3g01457 | 305 | Pfam | Mitochondrial carrier protein | 9 | 97 | IPR018108 | - | |
| Viun3g01457 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 105 | 197 | IPR018108 | - | |
| Viun3g01457 | 305 | SUPERFAMILY | Mitochondrial carrier | 9 | 295 | IPR023395 | - | |
| Viun3g01457 | 305 | Gene3D | Mitochondrial carrier domain | 11 | 303 | IPR023395 | - | |
| Viun3g01457 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 213 | 299 | IPR018108 | - | |
| Viun3g01457 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 6 | 95 | IPR018108 | - | |
| Viun3g01457 | 305 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 7 | 300 | - | - | |
| Viun3g01457 | 305 | FunFam | Mitochondrial arginine transporter BAC1 isoform A | 11 | 304 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun3g01457 | Viun-Chr3 | 9488956 | 9494938 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Viun3g01457 | 25 | 300 | Antiporters | AT1G79900 | 29.787 | 5.71e-32 | 119 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun3g01457 | K15109 | - | gmx:100815087 | 532.717 |