Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01434 ATGGATTCTGACTTCTGGACCTCGCGTCTTGCCGCCGCTAAACGCCAATACACGCTTCAGCATCACCATCAAAATTCTCACTTAGATCGGTTGGGAATCGATGATTTTGATGTGGAAGAAGAGGTGCGACCCGATTTCCCTTGCCCCTATTGCTATGAAGACTTTGACATCGCGTCTTTGTGTTCTCATCTTGAAGACGAACATTCTTGCGAATCGAGAGTCACGATTTGTCCTGTATGCTCCGTTAAAGTTGCAAGGGACATGTTAAGTCACATAACGCTGCAACACGGGCACTTATTCAAGGTACAGAGAAGACGCAGGTTAAGAAGAGTTGCTATTCCTAACAGTCAGACACTATCTCTCTTGGGTCGTGATCTTCGTGAGGCTCATCTACAGGTGCTTCTCGGTGGTGCTGGCGGAGGATACCGGTCAAACAGTGCAGCAGTGTCTAATGTTGCTACTGATCCCTTTCTATCCTCATTTATTTTGAATTTCCCAGCCTGTGAAGCAGAAGAGATTTCAAAATCTGTGGTAACAACTGCTGAGGATTCTTCTGCCAAAAATGTGACACCTGAACATATTTGGAAATCAAGTTTTGATCCTTCCTTGAGCAGCGAAGAGCGGGAGAAAAGGATGAGACAAGCTGCAGGGAGATCTGGTTTTGTGCAGGACTTGTTTCTTTCAACTTTGTTAGACGACTAA 702 0.4544 MDSDFWTSRLAAAKRQYTLQHHHQNSHLDRLGIDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPVCSVKVARDMLSHITLQHGHLFKVQRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGAGGGYRSNSAAVSNVATDPFLSSFILNFPACEAEEISKSVVTTAEDSSAKNVTPEHIWKSSFDPSLSSEEREKRMRQAAGRSGFVQDLFLSTLLDD 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01434 233 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Viun3g01434 233 PANTHER PROTEIN DEHYDRATION-INDUCED 19 32 232 IPR033347 -
Viun3g01434 233 SUPERFAMILY TRAF domain-like 46 123 - -
Viun3g01434 233 Pfam Stress-induced protein Di19, C-terminal 119 230 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01434 Viun-Chr3 9058485 9061390 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun3g01434 Di19_C 6.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01434 - - gmx:100792230 423.32