Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01429 ATGGAGGGAGAGGCTTGTTCCGAGGGAGAGGATAATCGGAGAAGGGGTGGCACAGACGATGATAGCAATGAGAATAACAACAACAAGATTGTGAATTCTAATGAGGGGCAGAGCAAGCCCAAGCGCCAGATGAAAACCCCTTTTCAACTTGAAACCCTCGAGAAGGCTTATGCTGTGGATAATTATCCGTCGGAGACGATGAGGGGAGAACTTTCTGAGAAATTAGGTTTGTCGGATCGGCAGCTACAGATGTGGTTCTGCCATAGGAGGTTGAAGGACAAGAAGGACTTGACGTCCAAGAAACTGCCACGGAAGATGGTGGCAGAGCCTTTGCCGGAATCACCTACAGATGACCCCATGCTGGGCCCCTCGGAGCTTGGTAATGAGTATGGATCCGGGTCCGGTTCAGGTTCCAGCCCTTATGCCCGAGTGGAGCCCCTGAACATTGTTCCTCGGGGTGTGCCTGGTTATTACGAGTCCCCACGGGCTATGATGGAGAATAGAGCAATTGCTTGTGTTGAGGCGCAGTTAGGAGAGCCGTTGAGGGAAGATGGACCAATTCTAGGAGTAGAGTTTGATCCATTGCCTCCAGATGCCTTTGGAGCACCTTTAGCAGCAACAGAACAGCAGAAGCTACCCAATTTTGCCTATGACAGTAAAATATATGAAAGACATGATAGTAGAGCCAATAAGGCTATGGCAAGGACATTCCGTGACTATCGATCTCTACCGAGCCAGTCTGGCCCTAGGTCTGATACTCCTGGACCGTTCAGCAAATCTCATTTACATGATGCAATGGAAGGTCCTGCCAGAAATCCTCATTTGGCTCTTGGAAATGAAACTGTACCTAGAATTCGTCCTAGTCAAGGTCAATTTCGTGCTCGTCTTTTGTCTCAACAAGATAAGCAATTGATTCCGTATCAGTCTCCTACGCGGGGTGATAATACCGCCCCAATTAGGGAATTTGACCCATCCATACTTAATGTTGGAACGAGCTCTCACTTTGCTGATCACCAAACTGTTGTGCCAGAAAATCACCATGCTCAACCTAGTGGTCAAGTTTTGCATAACAACAATGCAACACGGATTGAGAAGAAACGAAAGGGTGATGATGTTCGTGATGTAGAAGCGCATGAGATGAAAATCCGGAAAGAGATTGAGAAGCAAGATAACCTTAGACGAAAGAATGAAGAGAGGATGAGAAAAGAAATAGAGAAACAAGATCGTGAAAGAAAGAAGGAAGAAGAGAGGTTAATGCGTGAGAGACAACGAGAAGAGGAAAGAGCAAAACGGGAGCAAAAACGCGAAATTGAGCGGAGGGAAAAATTTTTGCTGAAAGAAAATTTAAAAGCAGAAAAAATGAAGATAAGAGAAGAGCTTCGCAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCCCTTGAGAAGGCGACTGCCCGTAGAATAGCTAAGGAATCTATGGAACTTATTGAGGATGAACAGCTGGAAATGATGGAGTTGGCTGCCACAAGCAAGGGGTTTTCCTCTATTATTCATCTTGATTTTGATACTCTGCAACATATTGAGTCATTTAGGGATTCATTGTGTGTTTTCCCACCAAAGAGTGTCAAGCTAAGAAAGCCATTTGCAATCAAACCCTGGATCAACTCAGAGAAGAATGTTGGCAATCTTCTCATGGTTTGGAGATTTTTGATTACTTTTGCTGATGTTCTGGAGTTATGGTCTTTTACTCTAGATGAGTTTGTTCAAGCATTTCATGACTATGATTCAAGATTATTGGGTGAGATACATGTTGCTCTTCTTAAGGTGGTAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGATCGAACCAAAATGGTGCTGCTAACTCTGGAGGTGGTCATCCAGAGATTGTGGAAGGCGCATATGCATGGGGCTTTGACATAAGGAATTGGCATAAGCACTTGAATCTATTGACATGGCCAGAAATTTTCCGACAGCTAGCTTTATCTGCAGGATATGGACCACAGTTAAAGAAAAGAAGTGCTACCTGTTCATATGCAAATAATAAAGACGAGGGAAGAAGTTGTGAAGATATCATTTCTAAACTTCGTAACGGTTCAGCAGCTGAAAATGCAGTCGCAAAAATGCAGGAGAGAGGTCTGTTAGCCCCTCGAAGATCTAGACATCGATTAACTCCTGGTACAGTTAAATTTGCAGCATTTCATGTTCTATCCCTTGAGGGTGACAAGGGATTGACAGTACTAGAGCTTGCAGAAAAAATTCAGAAATCTGGTCTTCGAGATCTGACGACCAGCAAGACACCTGAGGCATCAATTTCTGTTGCTTTAACAAGAGATACCAAGCTTTTTGAAAGAATAGCTCCATCAACATATTGTGTACGTCAGGCATTTAGAAAGAACCCTGCTGATGCCGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGAGGAGGATACAGATGATGTTGAAAGAGAAGAGTCAGAGAGTGACGAAATTGATGAGGACCCTGAAGTTGATGATTTGGTTAATTCTTCAAGTGCAAACAAAACATCTGAACCGTGTGATGATTTCTCATCAAATGGAAAAGAAAATTTGGGCCATGATGTTGGACTTCAGGGTGAGTTTGATAAGGATCTGCCTCGTTTTCCTGAGAGTTCTTCCAAGAAGGTTGATACTCCAATTGCTGTAACCGGGAAACCTGGTGCTTGTGAAGATTTGAACGTTGGAAATCTTGGTGAAGATAATATGGAAATTGATGAAAGCAAGCCCGGAGAGTCATGGGTTCAAGGGCTTGCAGAAGGAGAGTATTCTGACCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGTTGTGTTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAACAAATGTGGGCAGAAGCACAACTGGATAAATTTCGATTAAAAGATGATATTTTCAGTAAATCTGATTTTCCATCTCTTAATGGGAATAAAGTTGAAGTACAATATTCTTGTCCCGCCATGGAGGGAAACCAAAGCCCTTCGTTGCTTGGCATTAATATTGGCAACAATAGTAATAATGTGCCCTCTCCCAGCACTGCAGAAAATCAAAAAGCAGCTCTAGGTGTACAGAGCCTGTCTGTTGAAAAACACTCTTCCGTTCAAGATCTGTGCACTGGTGGCCCAGATAACCCTCAGATTCAGACATTTGCTCAGTATTCAAAAAGGTCACGGTCTCAGCTGAAATCTTATATTTTCCACATAGCAGAGGAGATGTGTGCCTACAGATCCTTACCCCTTGGGCAAGATCGAAGACGTAACCGTTATTGGCAATTTGTTGCATCTGCTTCTTCCAATGATCCTGGCTCTGGCAGGATCTTTGTTGAATTTCTTGATGGCAATTGGAGGCTGATTGATACTGAAGAGGCCTTTGATGCGCTTCTGAATTCCCTTGATTCGCGTGGGGTCAGGGAATCTCATTTGCGACTAATGTTGCAAAAGGTTGAGGGTTCCTTTAAGGAAAATGTCCGTAATAATACTCAATGTTCTAAAGCTGGAAGCAGAGGCGAAACATGTGTTAAAAATGAAGCTGACGAAACAGATTCCAGTCCTGATCGCCATACTGGATCTGACAGTCCCAGTAGCACCCTTTGTGGCTTGAACTCTGACAGTTTGGAAACTTCCTCATCCTTCAAAATTGAGCTTGGGAAAAGTGAGAGCGACAAGAAATCTGCATTGAGAAGGTATCAAGATTTTCAAAAGTGGACATGGAAAGAATGCTATAACTCATCAAAATTATGCGCCATGAAATATGGGAAGAAAAGATGCAAACCTCAGGTTGTCGTCTGTGATATCTGTCTCAATCCTTATTTCTTTGAAGACTCCCATTGCAGTTGTTGCCACCGAACTTTTCCCTCAAATAATGGATTTAATTTTTCTAAACACGCATTTCAATGCGGAGACAAATTATCAAAAGAGATTTGTATTTTGGATTCGTCTCTTCCCTTACGGACAAGATTGCTTAAGGCCCTGCTAGCTTATATTGAGGTTTCTATTCCACCTGAAGCTTTTCAATCAAATTGGATCGAAGATATTAGGAGGCATTGGAGTGTGAAGTTGAGCAAATCATCTTCTGTAGAGGAATTGCTACAGATATTGGCCCTACTTGAGAGAGCATTGAAGCGGGACTTTCTATCATCAACCTTCTCTACGACAGGGGAACAGTTGGGGTTGAACACTATGTCAGAGAGTGCTGCACAAACCTCTGCTGATCCTGAATCAGTTGCTGTACTTCCATGGGTTCCACTGACCACTTCAGCCGTGTCTCTCAGGCTTTTTGAGTTTGATGAATCAATTGTCTACGTACTGCATGAGAAACCTGAACCTCGTGAGGAGAAAGAAGATAGGCAGTACATAAAGCTTCCTTCAAGACACAATGCTTCCAAATCTATTAAAGTGGCTGAAACAGTAGACATGGGCCATGATGAATTCATGAAAGTTAAATCTCGTACTGTGAAAATTGTGCAAAGCAACAACAAACGAGGACGAGGTAGTGCTCTCAAAGGACGGAGTAAAAGTATATCTAAAACCAAGCAAAATAACGGCCGTCGGCACAGTGCAAAGGTTGCCGGGAATCTAAATCAAAGGGTAAAACAACAGGGAGGGGGATCACAAGGACGTGGTCGTCGAACAGTCCGGAAAAGAAGAGTGGGGAAAAAGGCTGTTGAAGATCTGTTGCTAGACCATAGGGGTGCCTCTCGTAGCAACAACATTGCTAGAGAATCATTAAGAAACTTGGATGAGGATTGGGATGATGAAAAAGCAAGTCCTATGACCCCCATCCATATGGGGACTGCTAACGTTAGTAACAGCACTGAAGAGGCTGAATCTGATGACAATGTCCAAGCAGTGGAATCCGATGACAATGGCCAAGCAGTGGAATCTGATGACAATGGCCAAGCTGTGGAATATGATCAAGGAAACTGGGAAATAGGTTTTAATGGTAATCCCAGCCGATGGCAGGGTGATCTTGTTGGAACAAGTGATGAAGATGTTGAAGCTTCTGAAGATGACAATGACAATGAGAATGGCATTGAAGAGAATGAAGAGGATTCAGATGCAGATGTTATGAGCGAGGGTTCAGATGCTACTGCAAACAGAATTGTAAATGAAGAAGAAAGCTCAGACTCTGATGTCTCTGAAGATTCTTCTGATTAG 5286 0.4308 MEGEACSEGEDNRRRGGTDDDSNENNNNKIVNSNEGQSKPKRQMKTPFQLETLEKAYAVDNYPSETMRGELSEKLGLSDRQLQMWFCHRRLKDKKDLTSKKLPRKMVAEPLPESPTDDPMLGPSELGNEYGSGSGSGSSPYARVEPLNIVPRGVPGYYESPRAMMENRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPLAATEQQKLPNFAYDSKIYERHDSRANKAMARTFRDYRSLPSQSGPRSDTPGPFSKSHLHDAMEGPARNPHLALGNETVPRIRPSQGQFRARLLSQQDKQLIPYQSPTRGDNTAPIREFDPSILNVGTSSHFADHQTVVPENHHAQPSGQVLHNNNATRIEKKRKGDDVRDVEAHEMKIRKEIEKQDNLRRKNEERMRKEIEKQDRERKKEEERLMRERQREEERAKREQKREIERREKFLLKENLKAEKMKIREELRKEKEAERRKAALEKATARRIAKESMELIEDEQLEMMELAATSKGFSSIIHLDFDTLQHIESFRDSLCVFPPKSVKLRKPFAIKPWINSEKNVGNLLMVWRFLITFADVLELWSFTLDEFVQAFHDYDSRLLGEIHVALLKVVIKDIEDVARTPSTGLGSNQNGAANSGGGHPEIVEGAYAWGFDIRNWHKHLNLLTWPEIFRQLALSAGYGPQLKKRSATCSYANNKDEGRSCEDIISKLRNGSAAENAVAKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGDKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYCVRQAFRKNPADAESILSEARKKIQIFENGFLAEEDTDDVEREESESDEIDEDPEVDDLVNSSSANKTSEPCDDFSSNGKENLGHDVGLQGEFDKDLPRFPESSSKKVDTPIAVTGKPGACEDLNVGNLGEDNMEIDESKPGESWVQGLAEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQLDKFRLKDDIFSKSDFPSLNGNKVEVQYSCPAMEGNQSPSLLGINIGNNSNNVPSPSTAENQKAALGVQSLSVEKHSSVQDLCTGGPDNPQIQTFAQYSKRSRSQLKSYIFHIAEEMCAYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEFLDGNWRLIDTEEAFDALLNSLDSRGVRESHLRLMLQKVEGSFKENVRNNTQCSKAGSRGETCVKNEADETDSSPDRHTGSDSPSSTLCGLNSDSLETSSSFKIELGKSESDKKSALRRYQDFQKWTWKECYNSSKLCAMKYGKKRCKPQVVVCDICLNPYFFEDSHCSCCHRTFPSNNGFNFSKHAFQCGDKLSKEICILDSSLPLRTRLLKALLAYIEVSIPPEAFQSNWIEDIRRHWSVKLSKSSSVEELLQILALLERALKRDFLSSTFSTTGEQLGLNTMSESAAQTSADPESVAVLPWVPLTTSAVSLRLFEFDESIVYVLHEKPEPREEKEDRQYIKLPSRHNASKSIKVAETVDMGHDEFMKVKSRTVKIVQSNNKRGRGSALKGRSKSISKTKQNNGRRHSAKVAGNLNQRVKQQGGGSQGRGRRTVRKRRVGKKAVEDLLLDHRGASRSNNIARESLRNLDEDWDDEKASPMTPIHMGTANVSNSTEEAESDDNVQAVESDDNGQAVESDDNGQAVEYDQGNWEIGFNGNPSRWQGDLVGTSDEDVEASEDDNDNENGIEENEEDSDADVMSEGSDATANRIVNEEESSDSDVSEDSSD 1761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01429 1761 MobiDBLite consensus disorder prediction 829 877 - -
Viun3g01429 1761 CDD homeodomain 41 95 IPR001356 GO:0003677
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1230 1245 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1 49 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1705 1733 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1625 1761 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1202 1245 - -
Viun3g01429 1761 Coils Coil 375 440 - -
Viun3g01429 1761 Gene3D - 22 98 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1214 1229 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 23 45 - -
Viun3g01429 1761 Pfam Homeodomain 39 95 IPR001356 GO:0003677
Viun3g01429 1761 MobiDBLite consensus disorder prediction 240 254 - -
Viun3g01429 1761 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1119 1191 IPR028941 -
Viun3g01429 1761 ProSiteProfiles HARE-type HTH domain profile. 732 801 IPR007759 GO:0006355
Viun3g01429 1761 Pfam DDT domain 552 606 IPR018501 -
Viun3g01429 1761 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 20 1761 IPR044977 GO:0006357
Viun3g01429 1761 MobiDBLite consensus disorder prediction 855 872 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1 22 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 889 912 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1533 1552 - -
Viun3g01429 1761 ProSiteProfiles 'Homeobox' domain profile. 36 96 IPR001356 GO:0003677
Viun3g01429 1761 MobiDBLite consensus disorder prediction 239 274 - -
Viun3g01429 1761 SUPERFAMILY Homeodomain-like 26 95 IPR009057 -
Viun3g01429 1761 SMART HOX_1 38 100 IPR001356 GO:0003677
Viun3g01429 1761 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 938 980 IPR028942 -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 392 435 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1533 1595 - -
Viun3g01429 1761 SMART testlast3 550 609 IPR018501 -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 829 854 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1638 1653 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 1560 1582 - -
Viun3g01429 1761 Coils Coil 446 477 - -
Viun3g01429 1761 MobiDBLite consensus disorder prediction 106 143 - -
Viun3g01429 1761 ProSiteProfiles DDT domain profile. 550 609 IPR018501 -
Viun3g01429 1761 Pfam HB1, ASXL, restriction endonuclease HTH domain 732 800 IPR007759 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01429 Viun-Chr3 9012971 9023153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01429 4 1692 Homeobox Transcription Factor Family AT1G28420 47.998 0.0 1310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Viun3g01429 WSD 2.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01429 - - gmx:100818817 2665.18