Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01426 ATGGAGTCGCGAGTGCTGTCACGCGCCGGAGTCTTCTCCTCCCTCGCTCACCTCCGCAAGCCGCCGCGGGAGGCCGTTGGCGGTGCCTCCTTCGTCACAGTGAAGACCGTGGGGTCCCTCGCCGACGGCGGGAATCTGATTTGGGGGAGGCAGCTGCGTCCGGAGCTCTGCTCGCCGGCTCTGAAAAAGGAGACCGTCCTCCTCCGGCCTTGCCTTGCCGCCGCCTCCTCGCCCGCCGAGGGTGGTGATTCCGCCGGGGAAAAGGTTGCTCCCGCGGGATTCTTTGGCAAGTACCCCGCTCTTGTCACCGGGTTTTTCTTCTTCACGTGGTACTTCTTGAACGTGATTTTCAACATCCTCAACAAGAAGATCTACAACTATTTCCCCTACCCGTACTTCGTATCCGTCATCCATTTATTCGTGGGTGTGGTGTACTGTTTGTTGAGCTGGACCGTGGGCCTTCCTAAGCGTGCTCCTATAGACTCCAACCTGCTGAAGTTGCTCATTCCGGTGGCTGTGTGCCATGCATTAGGCCACGTCACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACTCATACCATTAAAGCTCTTGAACCATTCTTCAATGCTGCTGCTTCACAGTTCATCCTTGGCCAATCCATTCCCATCACTTTGTGGCTGTCTCTGGCTCCCGTTGTTATTGGTGTGTCCATGGCATCTTTGACCGAGCTCTCTTTCAACTGGGTTGGCTTCATAAGTGCTATGATTTCAAACATTTCCTTCACCTACCGGAGCATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATGTCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCGCCTGCAGTAATTGTGGAAGGCCCTGCACTGTTGAAGCACGGCTTCAATGATGCTATTGCTAAAGTAGGTTTGGTCAAGTTCGTCTCAGATCTCTTCTGGGTTGGGATGTTTTACCATCTCTACAACCAGGTGGCTACCAACACTCTGGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGGAACGTACTGAAACGTGTATTTGTGATTGGATTCTCAATTATAGTCTTCGGTAACAAGATTAGCACCCAAACTGGTATAGGAACAGCCATTGCAATTGCTGGAGTGGCTCTCTACTCTCTCATCAAAGCCAGGATTGAGGAAGAGAAACGACAAGCGAAAGCAGCATAA 1218 0.5123 MESRVLSRAGVFSSLAHLRKPPREAVGGASFVTVKTVGSLADGGNLIWGRQLRPELCSPALKKETVLLRPCLAAASSPAEGGDSAGEKVAPAGFFGKYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLLSWTVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPAVIVEGPALLKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTAIAIAGVALYSLIKARIEEEKRQAKAA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01426 405 Coils Coil 388 405 - -
Viun3g01426 405 PANTHER SOLUTE CARRIER FAMILY 35 104 396 - -
Viun3g01426 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 238 - -
Viun3g01426 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 390 - -
Viun3g01426 405 Pfam Triose-phosphate Transporter family 102 389 IPR004853 -
Viun3g01426 405 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 399 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01426 Viun-Chr3 9002138 9006961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01426 1 403 Antiporters AT5G46110 77.966 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01426 K15283 - gmx:100794336 742.265