Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01423 ATGAACCACGGGTACATTGTTTATGATTTGGTTATGGTCACTCTATCCATGTCCCTCATAATTCTCGGTGCTGTCCTCTTTCTTGCATGCAAGAAGAAGAAACCAGATGAGTGTGAAGAACCCGTTGCCGTGAAGCACTGTGCTCGAGTGTACTCATTGATGGACATTGACGCTGTCACCGATAGCTTCAACCCTGGGAGAGTAGTAGGAAAGGGTCCTCTAGGAACCGTGTATGCTGGGGTGCAGGAGAATGGAGAGCTTGTGGCTGTGAAAAGGATCCATCCCGTGCTTGTGCTGAGCAACGCAGGGCTAGGATTCTCATCAGCGTTGAAATGGCTCTCTTCAGTTCAACATCCCAACATAGTTCCTATAATCGGATTCTCAGAAGCACCGGGCGAAAGAGTTATAGTGATGGAGTTTGGGCGCATGATGAGCTTGGAGTTCTGTTTGCACCAAAACGGTAATGGGGCATCGCTTTTGGATTGGAACAAGAGGATTAGAATTGCAGCAGGAGCAGCGAGAGGGCTTCAGTATCTGCATGAAGTGGCAACACCAAACATCGTACATGGGCGAGTCAAGTCTTCTAATGTTTTAATTGATGTCAACTTTTGTCCGAGGATTTGTGATTATGGTCTCAACTTTTTGGAAAAGAGAGAGGTGGTAGGTTATGTGGATGATGAGTATTGCGATGAAAGAGGGGGTGGTGTAAGCAAGGAAAGTGATGTTTATGGTTTAGGAGTTGTATTGCTTGAGCTATTAAGTGGTAGAGGATGCAAAGAAAGAGTGATAGTAGAGTGGGGTTTGGGTTTGATAAAGGAATTGAGTTTTGGTGAAGTTTTGGATCCTAGGTTGGTAATTCCTTGTGACATGAAGAATGTAGTTAGATTAGCGAAAGTTGCTTCAGCTTGTGTTGGGAATTCAAGGAAGTGCAGACCTTCCATAGGACAAGTGGCTACTATTTTGAACAGCTTAGAGATGGAAGTGTGCGTGTGA 993 0.4502 MNHGYIVYDLVMVTLSMSLIILGAVLFLACKKKKPDECEEPVAVKHCARVYSLMDIDAVTDSFNPGRVVGKGPLGTVYAGVQENGELVAVKRIHPVLVLSNAGLGFSSALKWLSSVQHPNIVPIIGFSEAPGERVIVMEFGRMMSLEFCLHQNGNGASLLDWNKRIRIAAGAARGLQYLHEVATPNIVHGRVKSSNVLIDVNFCPRICDYGLNFLEKREVVGYVDDEYCDERGGGVSKESDVYGLGVVLLELLSGRGCKERVIVEWGLGLIKELSFGEVLDPRLVIPCDMKNVVRLAKVASACVGNSRKCRPSIGQVATILNSLEMEVCV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01423 330 FunFam serine/threonine-protein kinase-like protein ACR4 29 140 - -
Viun3g01423 330 Pfam Protein kinase domain 66 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g01423 330 Gene3D Phosphorylase Kinase; domain 1 26 140 - -
Viun3g01423 330 ProSiteProfiles Protein kinase domain profile. 63 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g01423 330 PANTHER OS01G0253100 PROTEIN 35 324 - -
Viun3g01423 330 Gene3D Transferase(Phosphotransferase) domain 1 143 328 - -
Viun3g01423 330 SUPERFAMILY Protein kinase-like (PK-like) 43 321 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01423 Viun-Chr3 8930045 8931596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01423 48 321 Receptor kinase-like Gene Family AT3G59420 37.801 3.95e-48 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Viun3g01423 Pkinase 1.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01423 - - gmx:100809726 503.056