Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01349 ATGGGTTCTCCCGGTGGAGCCTGTTCGTCCGGTTCGAGTTCTCTGCAAAACTCTGGGTCCGAGGGCGAGCGAGAGATGGTGGATGAGAGGAAGAGGAAGAGAATGCAATCGAACCGGGAATCGGCACGCAGATCTCGGATGAGGAAACAGCAGCACCTGGAGGGTTTGAGTGCGCAATTGGATGAGCTGAAAAAGGAGAACAGTGAGATGAACAAGAACATAGGCATGACGACGCAGGTGTTCCTGAAGGTGGAAGCTGAGAACGCGATTCTGAGGGCGCAGATGGCGGAACTCAGCAACAGATTGAACTCTCTGAACGAAATCATCGGTTTCATAAACTCCACGAACTACTTGGTGTTGGATGAAGCACAGGAGACTCAGATGTTCAATGATTGTGGCTTCATGGATGCTTGGAATGGAATACCCTTCAACCAACAACCAATCATGGCTTCAGCTGACAATGACATCTTGATGATGTATTGA 483 0.4969 MGSPGGACSSGSSSLQNSGSEGEREMVDERKRKRMQSNRESARRSRMRKQQHLEGLSAQLDELKKENSEMNKNIGMTTQVFLKVEAENAILRAQMAELSNRLNSLNEIIGFINSTNYLVLDEAQETQMFNDCGFMDAWNGIPFNQQPIMASADNDILMMY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01349 160 MobiDBLite consensus disorder prediction 1 69 - -
Viun3g01349 160 MobiDBLite consensus disorder prediction 22 51 - -
Viun3g01349 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 156 - -
Viun3g01349 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 74 IPR004827 GO:0003700|GO:0006355
Viun3g01349 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Viun3g01349 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Viun3g01349 160 MobiDBLite consensus disorder prediction 1 21 - -
Viun3g01349 160 Coils Coil 46 73 - -
Viun3g01349 160 CDD bZIP_plant_GBF1 31 79 IPR045314 GO:0003700|GO:0006355
Viun3g01349 160 Gene3D - 28 81 - -
Viun3g01349 160 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Viun3g01349 160 FunFam BZIP transcription factor 28 79 - -
Viun3g01349 160 Coils Coil 81 108 - -
Viun3g01349 160 Pfam bZIP transcription factor 30 75 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01349 Viun-Chr3 8540527 8541855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01349 27 158 bZIP Transcription Factor Family AT2G18160 43.046 4.35e-34 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun3g01349 bZIP_1 2.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01349 K25786 - gmx:778139 223.016