Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01306 ATGAAGAATTTCGATGAATGGAAACCTTTCCTAGTAATGATAGCTATTGATTTTTGTTTAACCATGGTGAACATCCTTCTCAAGCAAGTCCTTCAAAAGGGAATGAACCATTTGGTTTTTGTCACATATCGTCTTTCAGTTTCTACTATATTTTTAGCCCCCATCAGCTACTTTAAGGAAAGAAATAGAAGACCACGGCTCACATTTCAAATTTTATGCTACCTTTTCTTCAGTGCCATTATTGGGGCATCCGTGACACAGTACTTCTTCCTTTTGGGGATCCAATATACCTCAGCCACATTTGCCTGTGCCTTTGTCAATATGGTGCCGGTGATAACCTTCATCATGGCATTGCCATTTGGGCTAGAAACAGTGAACATTAAATGCAGAGGTGGGAAAGCGAAGATTCTGGGTACATTTGTGTGTGTAGGAGGGGCATTAGTGTTGACACTTTACAGAGGAAAACCCTTGTTTGATGTGTCTCACTATGAAACAAGAGTTCCTCCGGTAGCCATGAAATCCGCAGTTGACGAAGGTAGTTCTAGTGGTAGAACAGCACAGAAATGGAGCATTGGTGTAATAGCTTTGATGATGGGAACCCTGTTCTGGTCTTTCTGGTTTATTCTACAGTCAAAAATAGGGAAGAGGTATCCTTGCCAGTACTCTAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTGTCCACTGGCACCAACTTGTCCTCTTGGATTCTCAAGGATAAGATGCAAATAATCACTGTTCTTTATTCTGGGATAGTTGGGTCAAGTGTGTGCTACGTGGGGATGTCATGGTGCGTGAAGAAGAGGGGTCCAGTCTTTACAGCAGCATTCAGCCCTCTGGTACAGATAATGTCGGGCATGATTGATATACCATACTTGCACGAGCAGCTTCATCTTGGAAGTGTGGTGGGCTCCGTGTTGGTGATGATGGGCTTGTACATTCTTCTTTGGGGCAAAAGCAAGGACATGATGCAGAATACTGACCCTAAGTTCCTCCAACAACCTGAGCAAACCAAGGAACAAGAACCACAAGTATAA 1077 0.4336 MKNFDEWKPFLVMIAIDFCLTMVNILLKQVLQKGMNHLVFVTYRLSVSTIFLAPISYFKERNRRPRLTFQILCYLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCRGGKAKILGTFVCVGGALVLTLYRGKPLFDVSHYETRVPPVAMKSAVDEGSSSGRTAQKWSIGVIALMMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGLSTGTNLSSWILKDKMQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPYLHEQLHLGSVVGSVLVMMGLYILLWGKSKDMMQNTDPKFLQQPEQTKEQEPQV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01306 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 333 - -
Viun3g01306 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Viun3g01306 358 PANTHER WAT1-RELATED PROTEIN 8 338 IPR030184 GO:0016020|GO:0022857
Viun3g01306 358 Pfam EamA-like transporter family 18 150 IPR000620 GO:0016020
Viun3g01306 358 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01306 Viun-Chr3 8226205 8228072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01306 1 263 Nodulin-like Gene Family AT3G30340 47.940 1.11e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01306 - - gmx:100791663 592.423